Fold library entry viewer: c1l5jB_

Added to library: Tue Mar 16 13:51:58 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	E	E	Y	R	K	H	V	A	E	R	A	A	E	G	I	A	P	K	P	L	D	A	N	Q	M	A	A	L	V	E	L	L	K	N	P	P	A	G	E	E	E	F	L	L	D	L	L	T	N	R	V	P	P	G	V	D	E	A	A	Y	V	K	A	G	F	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T																				S			T	T												S	S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	A	K	G	E	A	K	S	P	L	L	T	P	E	K	A	I	E	L	L	G	T	M	Q	G	G	Y	N	I	H	P	L	I	D	A	L	D	D	A	K	L	A	P	I	A	A	K	A	L	S	H	T	L	L	M	F	D	N	F	Y	D	V	E	E	K	A	K	A	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S		B	T	T	B										T	T	S		S	S	T	T							G	G	G		T	T	T										T			T	T	G	G	G										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	Y	A	K	Q	V	M	Q	S	W	A	D	A	E	W	F	L	N	R	P	A	L	A	E	K	L	T	V	T	V	F	K	V	T	G	E	T	N	T	D	D	L	S	P	A	P	D	A	W	S	R	P	D	I	P	L	H	A	L	A	M	L	K	N	A	R	E	G	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T					T	S					S																			S		G	G	G	G	G	G	T	T	S						T	T	T	T		S		B	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	D	Q	P	G	V	V	G	P	I	K	Q	I	E	A	L	Q	Q	K	G	F	P	L	A	Y	V	G	D	V	V	G	T	G	S	S	R	K	S	A	T	N	S	V	L	W	F	M	G	D	D	I	P	H	V	P	N	K	R	G	G	G	L	C	L	G	G	K	I	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	B	T	T	T	B		S									T	T	S	S												S				T											S				T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	F	F	N	T	M	E	D	A	G	A	L	P	I	E	V	D	V	S	N	L	N	M	G	D	V	I	D	V	Y	P	Y	K	G	E	V	R	N	H	E	T	G	E	L	L	A	T	F	E	L	K	T	D	V	L	I	D	E	V	R	A	G	G	R	I	P	L	I	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T									T	T			T	T							T	T	T	T					S	S	S										S		S	T								T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	G	L	T	T	K	A	R	E	A	L	G	L	P	H	S	D	V	F	R	Q	A	K	D	V	A	E	S	D	R	G	F	S	L	A	Q	K	M	V	G	R	A	C	G	V	K	G	I	R	P	G	A	Y	C	E	P	K	M	T	S	V	G	S	Q	D	T	T	G	P	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T						S	S											S													T	T	S	S				T	T						B		S						T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	R	D	E	L	K	D	L	A	C	L	G	F	S	A	D	L	V	M	Q	S	F	C	H	T	A	A	Y	P	K	P	V	D	V	N	T	H	H	T	L	P	D	F	I	M	N	R	G	G	V	S	L	R	P	G	D	G	V	I	H	S	W	L	N	R	M	L	L	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S	S			S	S								S	S	S	S	S																		T	T	T						T	T	S	B							G	G	G			T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	V	G	T	G	G	D	S	H	T	R	F	P	I	G	I	S	F	P	A	G	S	G	L	V	A	F	A	A	A	T	G	V	M	P	L	D	M	P	E	S	V	L	V	R	F	K	G	K	M	Q	P	G	I	T	L	R	D	L	V	H	A	I	P	L	Y	A	I	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	T	T				S	S	S																	S	B															S				T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	L	L	T	V	E	K	K	G	K	K	N	I	F	S	G	R	I	L	E	I	E	G	L	P	D	L	K	V	E	Q	A	F	E	L	T	D	A	S	A	E	R	S	A	A	G	C	T	I	K	L	N	K	E	P	I	I	E	Y	L	N	S	N	I	V	L	L	K	W	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	B		S		S	T	T			B	T	T	T	T	S						S		T	T												G	G	G	G	G	T		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	A	E	G	Y	G	D	R	R	T	L	E	R	R	I	Q	G	M	E	K	W	L	A	N	P	E	L	L	E	A	D	A	D	A	E	Y	A	A	V	I	D	I	D	L	A	D	I	K	E	P	I	L	C	A	P	N	D	P	D	D	A	R	P	L	S	A	V	Q	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		B																		S								T	T				S							G	G	G			S						T	T		T	T									T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	I	D	E	V	F	I	G	S	C	M	T	N	I	G	H	F	R	A	A	G	K	L	L	D	A	H	K	G	Q	L	P	T	R	L	W	V	A	P	P	T	R	M	D	A	A	Q	L	T	E	E	G	Y	Y	S	V	F	G	K	S	G	A	R	I	E	I	P	G	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		S						S	T	T																S		S			S	S							S	B										T	T									T						S	S		G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	C	M	G	N	Q	A	R	V	A	D	G	A	T	V	V	S	T	S	T	R	N	F	P	N	R	L	G	T	G	A	N	V	F	L	A	S	A	E	L	A	A	V	A	A	L	I	G	K	L	P	T	P	E	E	Y	Q	T	Y	V	A	Q	V	D	K	T	A	V	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T		S	S	S				T	T							S	S				T	T	S	S	S	T	T																		S	B													T	T	S	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
Sequence	Y	R	Y	L	N	F	N	Q	L	S	Q	Y	T	E	K	A	D	G	V	I	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					G	G	G										T

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PDB structure

FASTA sequence

Hidden Markov model

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