Fold library entry viewer: c1l5gA_

Added to library: Tue Mar 16 13:20:13 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	N	L	D	V	D	S	P	A	E	Y	S	G	P	E	G	S	Y	F	G	F	A	V	D	F	F	V	P	S	A	S	S	R	M	F	L	L	V	G	A	P	K	A	N	T	T	Q	P	G	I	V	E	G	G	Q	V	L	K	C	D	W	S	S	T	R	R	C	Q	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B			S	S								T	T	S		T	T	S								T	T		S									T	T				S	S	T	T		S	S		B							T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	F	D	A	T	G	N	R	D	Y	A	K	D	D	P	L	E	F	K	S	H	Q	W	F	G	A	S	V	R	S	K	Q	D	K	I	L	A	C	A	P	L	Y	H	W	R	T	E	M	K	Q	E	R	E	P	V	G	T	C	F	L	Q	D	G	T	K	T	V	E	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			S							T	T			S				T	T			B	T	S						S	S							T	T						S	S	S	S			B										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	C	R	S	Q	D	I	D	A	D	G	Q	G	F	C	Q	G	G	F	S	I	D	F	T	K	A	D	R	V	L	L	G	G	P	G	S	F	Y	W	Q	G	Q	L	I	S	D	Q	V	A	E	I	V	S	K	Y	D	P	N	V	Y	S	I	K	Y	N	N	Q	L	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	S	S		G	G	G	T	T	T	B			T	T	S						T	T	S							T	B					T	B													T			T	T		S	S				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	T	A	Q	A	I	F	D	D	S	Y	L	G	Y	S	V	A	V	G	D	F	N	G	D	G	I	D	D	F	V	S	G	V	P	R	A	A	R	T	L	G	M	V	Y	I	Y	D	G	K	N	M	S	S	L	Y	N	F	T	G	E	Q	M	A	A	Y	F	G	F	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T	T			B	T	S								S	S	S	S	S								T	T					T	B							S	S	S										S	S	T	T	S		B	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	A	T	D	I	N	G	D	D	Y	A	D	V	F	I	G	A	P	L	F	M	D	R	G	S	D	G	K	L	Q	E	V	G	Q	V	S	V	S	L	Q	R	A	S	G	D	F	Q	T	T	K	L	N	G	F	E	V	F	A	R	F	G	S	A	I	A	P	L	G	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S	S									T	T						T	T	S															T	T	S								B		S	S	T	T	S		G	G	G						S		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	Q	D	G	F	N	D	I	A	I	A	A	P	Y	G	G	E	D	K	K	G	I	V	Y	I	F	N	G	R	S	T	G	L	N	A	V	P	S	Q	I	L	E	G	Q	W	A	A	R	S	M	P	P	S	F	G	Y	S	M	K	G	A	T	D	I	D	K	N	G	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S	S								T	T		S	G	G	G											T	T																	T	T	S				T	T	S						S			S	S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	L	I	V	G	A	F	G	V	D	R	A	I	L	Y	R	A	R	P	V	I	T	V	N	A	G	L	E	V	Y	P	S	I	L	N	Q	D	N	K	T	C	S	L	P	G	T	A	L	K	V	S	C	F	N	V	R	F	C	L	K	A	D	G	K	G	V	L	P	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T							B													S		S	S			T	T							S	S	S																			S	S			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	N	F	Q	V	E	L	L	L	D	K	L	K	Q	K	G	A	I	R	R	A	L	F	L	Y	S	R	S	P	S	H	S	K	N	M	T	I	S	R	G	G	L	M	Q	C	E	E	L	I	A	Y	L	R	D	E	S	E	F	R	D	K	L	T	P	I	T	I	F	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B						S	S		S			T	T								T	T	S			S						B				S	S	S														G	G	G				S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	R	L	D	Y	R	T	A	A	D	T	T	G	L	Q	P	I	L	N	Q	F	T	P	A	N	I	S	R	Q	A	H	I	L	L	D	C	G	E	D	N	V	C	K	P	K	L	E	V	S	V	D	S	D	Q	K	K	I	Y	I	G	D	D	N	P	L	T	L	I	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S	S		S		T	T	T	T							T	T			S											S			S	S		S												T	T					S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	Q	N	Q	G	E	G	A	Y	E	A	E	L	I	V	S	I	P	L	Q	A	D	F	I	G	V	V	R	N	N	E	A	L	A	R	L	S	C	A	F	K	T	E	N	Q	T	R	Q	V	V	C	D	L	G	N	P	M	K	A	G	T	Q	L	L	A	G	L	R	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S		B	S	S									S	S									S		S	S	S	B										S	S	S									S	S	B		T	T					B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	H	Q	Q	S	E	M	D	T	S	V	K	F	D	L	Q	I	Q	S	S	N	L	F	D	K	V	S	P	V	V	S	H	K	V	D	L	A	V	L	A	A	V	E	I	R	G	V	S	S	P	D	H	V	F	L	P	I	P	N	W	E	H	K	E	N	P	E	T	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			S											S		S	S	S		B																							S	S	S				T	T		S	S					S	S			S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	V	G	P	V	V	Q	H	I	Y	E	L	R	N	N	G	P	S	S	F	S	K	A	M	L	H	L	Q	W	P	Y	K	Y	N	N	N	T	L	L	Y	I	L	H	Y	D	I	D	G	P	M	N	C	T	S	D	M	E	I	N	P	L	R	I	K	I	S	S	L	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S			S													T	T				S									S	S						S	S		S	S	T	T				S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	H	T	L	G	C	G	V	A	Q	C	L	K	I	V	C	Q	V	G	R	L	D	R	G	K	S	A	I	L	Y	V	K	S	L	L	W	T	E	T	F	M	N	K	E	N	Q	N	H	S	Y	S	L	K	S	S	A	S	F	N	V	I	E	F	P	Y	K	N	L	P	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				T	T	S	S														T	T													S					T	T	S	S																			S		T	T	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.
Sequence	D	I	T	N	S	T	L	V	T	T	N	V	T	W	G	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S

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PDB structure

FASTA sequence

Hidden Markov model

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