Fold library entry viewer: c1kv9A_

Added to library: Tue Mar 16 13:15:03 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	G	V	D	E	A	A	I	R	A	T	E	Q	A	G	G	E	W	L	S	H	G	R	T	Y	A	E	Q	R	F	S	P	L	K	Q	I	D	A	S	N	V	R	S	L	G	L	A	W	Y	M	D	L	D	N	T	R	G	L	E	A	T	P	L	F	H	D	G	V	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B								T	T	T			S		B		B	T	T	B	S	T	T									S	S		T	T	T	G	G	G										S			S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	S	M	S	W	S	R	V	I	A	V	D	A	A	S	G	K	E	L	W	R	Y	D	P	E	V	A	K	V	K	A	R	T	S	C	C	D	A	V	N	R	G	V	A	L	W	G	D	K	V	Y	V	G	T	L	D	G	R	L	I	A	L	D	A	K	T	G	K	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G							T	T	T													G	G	G	G	G	G		T	T		S									B	T							T	T	S							T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	S	Q	Q	T	T	D	P	A	K	P	Y	S	I	T	G	A	P	R	V	V	K	G	K	V	I	I	G	N	G	G	A	E	Y	G	V	R	G	F	V	S	A	Y	D	A	D	T	G	K	L	A	W	R	F	Y	T	V	P	G	D	P	A	L	P	Y	E	H	P	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		T	T	S	S		B			S						T	T							B		T	T	T			B								T	T	T									S	S				T	T	S			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	E	A	A	K	T	W	Q	G	D	Q	Y	W	K	L	G	G	G	G	T	V	W	D	S	M	A	Y	D	P	E	L	D	L	L	Y	V	G	T	G	N	G	S	P	W	N	R	E	V	R	S	P	G	G	G	D	N	L	Y	L	S	S	I	L	A	I	R	P	D	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			S	S													S						T	T	T	T											S	S						S	T	T					T	T	T	T							T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	L	A	W	H	Y	Q	V	T	P	G	D	S	W	D	F	T	A	T	Q	Q	I	T	L	A	E	L	N	I	D	G	K	P	R	K	V	L	M	Q	A	P	K	N	G	F	F	Y	V	L	D	R	T	N	G	K	L	I	S	A	E	K	F	G	K	V	T	W	A	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	T	T			S						S										T	T											T	T	S							T	T	T									S	S				S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	D	L	A	T	G	R	P	V	E	A	P	G	V	R	Y	E	K	E	P	I	V	M	W	P	S	P	F	G	A	H	N	W	H	S	M	S	F	N	P	G	T	G	L	V	Y	I	P	Y	Q	E	V	P	G	V	Y	R	N	E	G	K	D	F	V	T	R	K	A	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T							T	T	T	T		S	S	S					S	S		T	T		S	S		S	S						T	T	T	T																	G	G	G					S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	A	A	G	F	A	D	A	T	D	V	P	A	A	V	V	S	G	A	L	L	A	W	D	P	V	K	Q	K	A	A	W	K	V	P	Y	P	T	H	W	N	G	G	T	L	S	T	A	G	N	L	V	F	Q	G	T	A	A	G	Q	M	H	A	Y	S	A	D	K	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		G	G	G						G	G	G										T	T	T	T									S	S	S									T	T	T							T	T	S							T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	L	W	Q	F	E	A	Q	S	G	I	V	A	A	P	M	T	F	E	L	A	G	R	Q	Y	V	A	I	M	A	G	W	G	G	V	A	T	L	T	G	G	E	S	M	N	L	P	G	M	K	N	R	S	R	L	L	V	F	A	L	D	G	K	A	Q	L	P	P	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S				S								T	T												S								G	G	G	G	S	T	T													T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	A	P	A	K	V	E	R	V	P	Q	P	V	T	A	A	P	E	Q	V	Q	A	G	K	Q	L	Y	G	Q	F	C	S	V	C	H	G	M	G	T	I	S	G	G	L	I	P	D	L	R	Q	S	S	D	A	T	R	E	H	F	Q	Q	I	V	L	Q	G	A	L	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																															T						G	G	G				S	S	S			G	G	G								T									T	T	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Sequence	L	G	M	P	S	F	D	D	S	L	K	P	E	E	V	E	Q	I	K	L	Y	V	M	S	R	E	Y	E	D	Y	M	A	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T					T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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