Fold library entry viewer: c1koaA_

Added to library: Tue Mar 16 13:44:16 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	D	N	Y	V	F	D	I	W	K	Q	Y	Y	P	Q	P	V	E	I	K	H	D	H	V	L	D	H	Y	D	I	H	E	E	L	G	T	G	A	F	G	V	V	H	R	V	T	E	R	A	T	G	N	N	F	A	A	K	F	V	M	T	P	H	E	S	D	K	E	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G																B		S		G	G	G	T											T	T									T	T	T	T												S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	K	E	I	Q	T	M	S	V	L	R	H	P	T	L	V	N	L	H	D	A	F	E	D	D	N	E	M	V	M	I	Y	E	F	M	S	G	G	E	L	F	E	K	V	A	D	E	H	N	K	M	S	E	D	E	A	V	E	Y	M	R	Q	V	C	K	G	L	C	H	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			T	T	B										T	T											S		B						T		T	T	S		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	E	N	N	Y	V	H	L	D	L	K	P	E	N	I	M	F	T	T	K	R	S	N	E	L	K	L	I	D	F	G	L	T	A	H	L	D	P	K	Q	S	V	K	V	T	T	G	T	A	E	F	A	A	P	E	V	A	E	G	K	P	V	G	Y	Y	T	D	M	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								G	G	G				S	S	T	T	S									T	T						T	T	S							S		T	T	T								T			B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	G	V	L	S	Y	I	L	L	S	G	L	S	P	F	G	G	E	N	D	D	E	T	L	R	N	V	K	S	C	D	W	N	M	D	D	S	A	F	S	G	I	S	E	D	G	K	D	F	I	R	K	L	L	L	A	D	P	N	T	R	M	T	I	H	Q	A	L	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S		S	S			S	S											T				S			G	G	G	G	G															S	S	G	G	G	S									S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	W	L	T	P	G	N	A	P	G	R	D	S	Q	I	P	S	S	R	Y	T	K	I	R	D	S	I	K	T	K	Y	D	A	W	P	E	P	L	P	P	L	G	R	I	S	N	Y	S	S	L	R	K	H	R	P	Q	E	Y	S	I	R	D	A	F	W	D	R	S	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S		T	T			S					B		T	T	T	T												T	T	S				S	S	G	G	G	G	G	G	G			G	G	G	G	G						T						B		G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	P	R	F	I	V	K	P	Y	G	T	E	V	G	E	G	Q	S	A	N	F	Y	C	R	V	I	A	S	S	P	P	V	V	T	W	H	K	D	D	R	E	L	K	Q	S	V	K	Y	M	K	R	Y	N	G	N	D	Y	G	L	T	I	N	R	V	K	G	D	D	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S														T	T	S											S	S									T	T					S	B	T	T	B	B				S	T	T							S				S	G	G	G	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Sequence	E	Y	T	V	R	A	K	N	S	Y	G	T	K	E	E	I	V	F	L	N	V	T	R	H	S	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T														S

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PDB structure

FASTA sequence

Hidden Markov model

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