PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1kjjA_

Fold library id	PDB Header	Molecule	Title
c1kjjA_	PDB header: transferase	Chain: A: PDB Molecule: phosphoribosylglycinamide formyltransferase 2;	PDBTitle: crystal structure of glycniamide ribonucleotide2 transformylase in complex with mg-atp-gamma-s

Links to external resources
Added to library: Tue Mar 16 13:35:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T L L G T A L R P A A T R V M L L G S G E L G K E V A I E C Q R L G V E V I A V D R Y A D A P A M H V A H R S H V I N M L D G D A L R R V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T
S T T T
S S T T
G G G G G S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E L E K P H Y I V P E I E A I A T D M L I Q L E E E G L N V V P C A R A T K L T M N R E G I R R L A A E E L Q L P T S T Y R F A D S E S L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S
T T
S S
T S T T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R E A V A D I G Y P C I V K P V M S S S G K G Q T F I R S A E Q L A Q A W K Y A Q Q G G R V I V E G V V K F D F E I T L L T V S A V D G V H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
T T T T
S G G G
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence F C A P V G H R Q E D G D Y R E S W Q P Q Q M S P L A L E R A Q E I A R K V V L A L G G Y G L F G V E L F V C G D E V I F S E V S P R P H D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T T S S
G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence T G M V T L I S Q D L S E F A L H V R A F L G L P V G G I R Q Y G P A A S A V I L P Q L T S Q N V T F D N V Q N A V G A D L Q I R L F G K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G B S S
T T
B
S S
S S
G G G T
B T T
S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . .

Sequence E I D G S R R L G V A L A T A E S V V D A I E R A K H A A G Q V K V Q G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	L	L	G	T	A	L	R	P	A	A	T	R	V	M	L	L	G	S	G	E	L	G	K	E	V	A	I	E	C	Q	R	L	G	V	E	V	I	A	V	D	R	Y	A	D	A	P	A	M	H	V	A	H	R	S	H	V	I	N	M	L	D	G	D	A	L	R	R	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	T	T										S												T	T	T								S	S	T	T		G	G	G	G	G	S	S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	L	E	K	P	H	Y	I	V	P	E	I	E	A	I	A	T	D	M	L	I	Q	L	E	E	E	G	L	N	V	V	P	C	A	R	A	T	K	L	T	M	N	R	E	G	I	R	R	L	A	A	E	E	L	Q	L	P	T	S	T	Y	R	F	A	D	S	E	S	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S						S	S		S											T	T				S	S									T	S										T	T	S											S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	E	A	V	A	D	I	G	Y	P	C	I	V	K	P	V	M	S	S	S	G	K	G	Q	T	F	I	R	S	A	E	Q	L	A	Q	A	W	K	Y	A	Q	Q	G	G	R	V	I	V	E	G	V	V	K	F	D	F	E	I	T	L	L	T	V	S	A	V	D	G	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S						S	S			T	T	T	T						S	G	G	G																							S											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	C	A	P	V	G	H	R	Q	E	D	G	D	Y	R	E	S	W	Q	P	Q	Q	M	S	P	L	A	L	E	R	A	Q	E	I	A	R	K	V	V	L	A	L	G	G	Y	G	L	F	G	V	E	L	F	V	C	G	D	E	V	I	F	S	E	V	S	P	R	P	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																																S	S											T	T									S	S			G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	G	M	V	T	L	I	S	Q	D	L	S	E	F	A	L	H	V	R	A	F	L	G	L	P	V	G	G	I	R	Q	Y	G	P	A	A	S	A	V	I	L	P	Q	L	T	S	Q	N	V	T	F	D	N	V	Q	N	A	V	G	A	D	L	Q	I	R	L	F	G	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G					B	S	S											T	T								B		S	S													S	S						G	G	G	T		B	T	T									S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Sequence	E	I	D	G	S	R	R	L	G	V	A	L	A	T	A	E	S	V	V	D	A	I	E	R	A	K	H	A	A	G	Q	V	K	V	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S