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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1kj2H_

Fold library idPDB HeaderMoleculeTitle
c1kj2H_PDB header: immune systemChain: H: PDB Molecule: allogeneic h-2kb mhc class i molecule;PDBTitle: murine alloreactive scfv tcr-peptide-mhc class i molecule2 complex


Added to library: Tue Mar 16 12:29:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGN
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Known secondary structure (DSSP)



SSS
S
TTSSSSS

SSGGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQSFRVDLRTLLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAA
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Known secondary structure (DSSP) TT

TTS


TTS
TT
TTSS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LITKHKWEQAGEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYP
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Known secondary structure (DSSP) TTTT

B

TTTBS
 .........220.........230.........240.........250.........260.........270......
Sequence ADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRWEP
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Known secondary structure (DSSP) S

TT

SS



SSS
TT
GGG
TTSSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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