Fold library entry viewer: c1kitA_

Added to library: Tue Mar 16 12:21:04 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	L	F	D	Y	N	A	T	G	D	T	E	F	D	S	P	A	K	Q	G	W	M	Q	D	N	T	N	N	G	S	G	V	L	T	N	A	D	G	M	P	A	W	L	V	Q	G	I	G	G	R	A	Q	W	T	Y	S	L	S	T	N	Q	H	A	Q	A	S	S	F	G	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S	T	T	T	S	T	T	T	T	T							T	T									T	T									S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	M	T	T	E	M	K	V	L	S	G	G	M	I	T	N	Y	Y	A	N	G	T	Q	R	V	L	P	I	I	S	L	D	S	S	G	N	L	V	V	E	F	E	G	Q	T	G	R	T	V	L	A	T	G	T	A	A	T	E	Y	H	K	F	E	L	V	F	L	P	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S									T	T											T	T	S							T	T										T	T	S	T	T	S												S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	P	S	A	S	F	Y	F	D	G	K	L	I	R	D	N	I	Q	P	T	A	S	K	Q	N	M	I	V	W	G	N	G	S	S	N	T	D	G	V	A	A	Y	R	D	I	K	F	E	I	Q	G	D	V	I	F	R	G	P	D	R	I	P	S	I	V	A	S	S	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								T	T																								S	S	S														S							T	T										T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	G	V	V	T	A	F	A	E	K	R	V	G	G	G	D	P	G	A	L	S	N	T	N	D	I	I	T	R	T	S	R	D	G	G	I	T	W	D	T	E	L	N	L	T	E	Q	I	N	V	S	D	E	F	D	F	S	D	P	R	P	I	Y	D	P	S	S	N	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T											T		S	S	T	T		T	T											T	T	S	S	S	S							S	S	T	T	T		S	S	S													T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	V	S	Y	A	R	W	P	T	D	A	A	Q	N	G	D	R	I	K	P	W	M	P	N	G	I	F	Y	S	V	Y	D	V	A	S	G	N	W	Q	A	P	I	D	V	T	D	Q	V	K	E	R	S	F	Q	I	A	G	W	G	G	S	E	L	Y	R	R	N	T	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T			T	G	G	G				T	T	S											T	T	T	T													S									T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	S	Q	Q	D	W	Q	S	N	A	K	I	R	I	V	D	G	A	A	N	Q	I	Q	V	A	D	G	S	R	K	Y	V	V	T	L	S	I	D	E	S	G	G	L	V	A	N	L	N	G	V	S	A	P	I	I	L	Q	S	E	H	A	K	V	H	S	F	H	D	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S														S									S	S	B										T	T	S							S	S			S							S					T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	Q	Y	S	A	L	N	H	T	T	T	L	F	V	D	G	Q	Q	I	T	T	W	A	G	E	V	S	Q	E	N	N	I	Q	F	G	N	A	D	A	Q	I	D	G	R	L	H	V	Q	K	I	V	L	T	Q	Q	G	H	N	L	V	E	F	D	A	F	Y	L	A	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T							T	T										B		S											S	S	S														T	T													T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	P	E	V	E	K	D	L	E	K	L	G	W	T	K	I	K	T	G	N	T	M	S	L	Y	G	N	A	S	V	N	P	G	P	G	H	G	I	T	L	T	R	Q	Q	N	I	S	G	S	Q	N	G	R	L	I	Y	P	A	I	V	L	D	R	F	F	L	N	V	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S								T														S		S						S	S									T	T	S	T	T			T	T											S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	Y	S	D	D	G	G	S	N	W	Q	T	G	S	T	L	P	I	P	F	R	W	K	S	S	S	I	L	E	T	L	E	P	S	E	A	D	M	V	E	L	Q	N	G	D	L	L	L	T	A	R	L	D	F	N	Q	I	V	N	G	V	N	Y	S	P	R	Q	Q	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	T	T	S	S																T	T																T	T	S										S					T	T					S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	K	D	G	G	I	T	W	S	L	L	E	A	N	N	A	N	V	F	S	N	I	S	T	G	T	V	D	A	S	I	T	R	F	E	Q	S	D	G	S	H	F	L	L	F	T	N	P	Q	G	N	P	A	G	T	N	G	R	Q	N	L	G	L	W	F	S	F	D	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	S	S	S									G	G	G	S	T	T			S	S												T	T	S												S	S	T	T		S	S	S	B	S							S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Sequence	V	T	W	K	G	P	I	Q	L	V	N	G	A	S	A	Y	S	D	I	Y	Q	L	D	S	E	N	A	I	V	I	V	E	T	D	N	S	N	M	R	I	L	R	M	P	I	T	L	L	K	Q	K	L	T	L	S	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S	S	B			S								T	T									G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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