Fold library entry viewer: c1kblA_

Added to library: Tue Mar 16 13:14:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	K	W	V	Y	K	F	E	E	G	N	A	S	M	R	N	L	L	G	G	K	G	C	N	L	A	E	M	T	I	L	G	M	P	I	P	Q	G	F	T	V	T	T	E	A	C	T	E	Y	Y	N	S	G	K	Q	I	T	Q	E	I	Q	D	Q	I	F	E	A	I	T	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G			G	G	G																	T	T																			T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	E	E	L	N	G	K	K	F	G	D	T	E	D	P	L	L	V	S	V	R	S	G	A	R	A	S	M	P	G	M	M	D	T	I	L	N	L	G	L	N	D	V	A	V	E	G	F	A	K	K	T	G	N	P	R	F	A	Y	D	S	Y	R	R	F	I	Q	M	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S		B	T		S	S	S		B									S	S			T	T	S	S							T			T	T										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	V	V	M	E	V	P	K	S	H	F	E	K	I	I	D	A	M	K	E	E	K	G	V	H	F	D	T	D	L	T	A	D	D	L	K	E	L	A	E	K	F	K	A	V	Y	K	E	A	M	N	G	E	E	F	P	Q	E	P	K	D	Q	L	M	G	A	V	K	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																		T				S	G	G	G																			T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	R	S	W	D	N	P	R	A	I	V	Y	R	R	M	N	D	I	P	G	D	W	G	T	A	V	N	V	Q	T	M	V	F	G	N	K	G	E	T	S	G	T	G	V	A	F	T	R	N	P	S	T	G	E	K	G	I	Y	G	E	Y	L	I	N	A	Q	G	E	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S										T	T			G	G	G												T	T	S	S	T	T											T	T	T												S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	A	G	V	R	T	P	Q	P	I	T	Q	L	E	N	D	M	P	D	C	Y	K	Q	F	M	D	L	A	M	K	L	E	K	H	F	R	D	M	Q	D	M	E	F	T	I	E	E	G	K	L	Y	F	L	Q	T	R	N	G	K	R	T	A	P	A	A	L	Q	I	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S	S					G	G	G																								T	S										T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	L	V	D	E	G	M	I	T	E	E	E	A	V	V	R	I	E	A	K	S	L	D	Q	L	L	H	P	T	F	N	P	A	A	L	K	A	G	E	V	I	G	S	A	L	P	A	S	P	G	A	A	A	G	K	V	Y	F	T	A	D	E	A	K	A	A	H	E	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S									S		G	G	G	G	G	G	G	G	S											S												S								S	S										T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	R	V	I	L	V	R	L	E	T	S	P	E	D	I	E	G	M	H	A	A	E	G	I	L	T	V	R	G	G	M	T	S	H	A	A	V	V	A	R	G	M	G	T	C	C	V	S	G	C	G	E	I	K	I	N	E	E	A	K	T	F	E	L	G	G	H	T	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			G	G	G								S					S	S			T	T	S										T								T	T					T	T	T	T					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	G	D	Y	I	S	L	D	G	S	T	G	K	I	Y	K	G	D	I	E	T	Q	E	A	S	V	S	G	S	F	E	R	I	M	V	W	A	D	K	F	R	T	L	K	V	R	T	N	A	D	T	P	E	D	T	L	N	A	V	K	L	G	A	E	G	I	G	L	C	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							T	T	T						S																										S								S										T	T			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	E	H	M	F	F	E	A	D	R	I	M	K	I	R	K	M	I	L	S	D	S	V	E	A	R	E	E	A	L	N	E	L	I	P	F	Q	K	G	D	F	K	A	M	Y	K	A	L	E	G	R	P	M	T	V	R	Y	L	D	P	P	L	H	E	F	V	P	H	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T					S															S										T	T																T	T										S		G	G	G	G	S			S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	E	Q	A	E	L	A	K	N	M	G	L	T	L	A	E	V	K	A	K	V	D	E	L	H	E	F	N	P	M	M	G	H	R	G	C	R	L	A	V	T	Y	P	E	I	A	K	M	Q	T	R	A	V	M	E	A	A	I	E	V	K	E	E	T	G	I	D	I	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T																S		G	G	G	S	S		T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	I	M	I	P	L	V	G	E	K	K	E	L	K	F	V	K	D	V	V	V	E	V	A	E	Q	V	K	K	E	K	G	S	D	M	Q	Y	H	I	G	T	M	I	E	I	P	R	A	A	L	T	A	D	A	I	A	E	E	A	E	F	F	S	F	G	T	N	D	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S			S																							T													S						T					T	T	T		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Q	M	T	F	G	F	S	R	D	D	A	G	K	F	L	D	S	Y	Y	K	A	K	I	Y	E	S	D	P	F	A	R	L	D	Q	T	G	V	G	Q	L	V	E	M	A	V	K	K	G	R	Q	T	R	P	G	L	K	C	G	I	C	G	E	H	G	G	D	P	S	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																T	T	S		S	S		T	T	T	S			T	T	T																	T	T							S	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.
Sequence	E	F	C	H	K	V	G	L	N	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A	Q	A	A	L	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		S						G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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