Fold library entry viewer: c1kb0A_

Added to library: Tue Mar 16 13:37:07 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	G	P	A	A	Q	A	A	A	A	V	Q	R	V	D	G	D	F	I	R	A	N	A	A	R	T	P	D	W	P	T	I	G	V	D	Y	A	E	T	R	Y	S	R	L	D	Q	I	N	A	A	N	V	K	D	L	G	L	A	W	S	Y	N	L	E	S	T	R	G	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T		S							G	G	G	T			S	B		S	T	T	S	S	T	T									S	S		T	T	T	G	G	G													S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	T	P	V	V	V	D	G	I	M	Y	V	S	A	S	W	S	V	V	H	A	I	D	T	R	T	G	N	R	I	W	T	Y	D	P	Q	I	D	R	S	T	G	F	K	G	C	C	D	V	V	N	R	G	V	A	L	W	K	G	K	V	Y	V	G	A	W	D	G	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							G	G	G							T	T	T	T												G	G	G	G	G	G	S	S	S		S									T	T							T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	A	L	D	A	A	T	G	K	E	V	W	H	Q	N	T	F	E	G	Q	K	G	S	L	T	I	T	G	A	P	R	V	F	K	G	K	V	I	I	G	N	G	G	A	E	Y	G	V	R	G	Y	I	T	A	Y	D	A	E	T	G	E	R	K	W	R	W	F	S	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T									T	T	T	T			S	S		B			S						T	T							B		T	T	T			B								T	T	T									S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	D	P	S	K	P	F	E	D	E	S	M	K	R	A	A	R	T	W	D	P	S	G	K	W	W	E	A	G	G	G	G	T	M	W	D	S	M	T	F	D	A	E	L	N	T	M	Y	V	G	T	G	N	G	S	P	W	S	H	K	V	R	S	P	K	G	G	D	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S			S	S								T	T	S		G	G	G													S						T	T	T	T											S	S						S	T	T					T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	L	A	S	I	V	A	L	D	P	D	T	G	K	Y	K	W	H	Y	Q	E	T	P	G	D	N	W	D	Y	T	S	T	Q	P	M	I	L	A	D	I	K	I	A	G	K	P	R	K	V	I	L	H	A	P	K	N	G	F	F	F	V	L	D	R	T	N	G	K	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T							T	T	T									S	S	T	T			S						S										T	T											T	T	S							T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	A	K	N	F	V	P	V	N	W	A	S	G	Y	D	K	H	G	K	P	I	G	I	A	A	A	R	D	G	S	K	P	Q	D	A	V	P	G	P	Y	G	A	H	N	W	H	P	M	S	F	N	P	Q	T	G	L	V	Y	L	P	A	Q	N	V	P	V	N	L	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S	S						T	T	S						G	G	G	G		T	T	S					S	S		T	T		S	S		S	S						T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	K	K	W	E	F	N	Q	A	G	P	G	K	P	Q	S	G	T	G	W	N	T	A	K	F	F	N	A	E	P	P	K	S	K	P	F	G	R	L	L	A	W	D	P	V	A	Q	K	A	A	W	S	V	E	H	V	S	P	W	N	G	G	T	L	T	T	A	G	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			T	T				T	T	S	T	T	G	G	G	T									S	S				S											T	T	T	T									S	S	S									T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	F	Q	G	T	A	D	G	R	L	V	A	Y	H	A	A	T	G	E	K	L	E	A	P	T	G	T	G	V	V	A	A	P	S	T	Y	M	V	D	G	R	Q	Y	V	S	V	A	V	G	W	G	G	V	Y	G	L	A	A	R	A	T	E	R	Q	G	P	G	T	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S							T	T	T			B						S	S				S								T	T																				S		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	F	V	V	G	G	K	A	R	M	P	E	T	G	Q	L	L	Q	G	V	K	Y	D	P	A	K	V	E	A	G	T	M	L	Y	V	A	N	C	V	F	C	H	G	V	P	G	V	D	R	G	G	N	I	P	N	L	G	Y	M	D	A	S	Y	I	E	N	L	P	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		B																	G	G	G												T						S	T	T	T	S			S	S	S			G	G	G	S							T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Sequence	V	F	K	G	P	A	M	V	R	G	M	P	D	F	T	G	K	L	S	G	D	D	V	E	S	L	K	A	F	I	Q	G	T	A	D	A	I	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T	G	G	G	T					T	T	T	S		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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