Fold library entry viewer: c1k1yA_

Added to library: Tue Mar 16 13:54:54 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	R	I	N	F	I	F	G	I	H	N	H	Q	P	L	G	N	F	G	W	V	F	E	E	A	Y	N	R	S	Y	R	P	F	M	E	I	L	E	E	F	P	E	M	K	V	N	V	H	F	S	G	P	L	L	E	W	I	E	E	N	K	P	D	Y	L	D	L	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T													T										T		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	I	K	R	G	Q	L	E	I	V	V	A	G	F	Y	E	P	V	L	A	A	I	P	K	E	D	R	L	V	Q	I	E	M	L	K	D	Y	A	R	K	L	G	Y	D	A	K	G	V	W	L	T	E	R	V	W	Q	P	E	L	V	K	S	L	R	E	A	G	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T						B			T	T		B		G	G	G	S																			T	T									G	G	G				T	T								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	V	V	V	D	D	Y	H	F	M	S	A	G	L	S	K	E	E	L	F	W	P	Y	Y	T	E	D	G	G	E	V	I	T	V	F	P	I	D	E	K	L	R	Y	L	I	P	F	R	P	V	K	K	T	I	E	Y	L	E	S	L	T	S	D	D	P	S	K	V	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T			G	G	G		S	S							T	T																T	T	T	S															S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	H	D	D	G	E	K	F	G	V	W	P	G	T	Y	E	W	V	Y	E	K	G	W	L	R	E	F	F	D	A	I	T	S	N	E	K	I	N	L	M	T	Y	S	E	Y	L	S	K	F	T	P	R	G	L	V	Y	L	P	I	A	S	Y	F	E	M	S	E	W	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T	T	T	S	T	T						T	T	T												S		T	T																		B					S				T	T					T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	A	K	Q	A	K	L	F	V	E	F	V	E	Q	L	K	E	E	G	K	F	E	K	Y	R	V	F	V	R	G	G	I	W	K	N	F	F	F	K	Y	P	E	S	N	F	M	H	K	R	M	L	M	V	S	K	A	V	R	D	N	P	E	A	R	K	Y	I	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T						G	G	G						G	G	G																							T	T											T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	C	N	D	A	Y	W	H	G	V	F	G	G	I	Y	L	P	H	L	R	R	T	V	W	E	N	I	I	K	A	Q	R	Y	L	K	P	E	N	K	I	L	D	V	D	F	D	G	R	A	E	I	M	V	E	N	D	G	F	I	A	T	I	K	P	H	Y	G	G	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B	G	G	G	G			S	S	S		G	G	G																	T	T	S									S	S		S	S	S								S	S							T	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	E	L	S	S	K	R	K	A	V	N	Y	N	D	V	L	P	R	R	W	E	H	Y	H	E	Q	I	P	E	E	I	R	R	E	L	A	Y	D	W	Q	L	R	A	I	L	Q	D	H	F	I	K	P	E	E	T	L	D	N	Y	R	L	V	K	Y	H	E	L	G	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T			T	T									T	T										T	T					S	S												T	T								T	T	T	S				B	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	N	Q	P	Y	E	Y	E	M	I	E	N	G	V	K	L	W	R	E	G	G	V	Y	A	E	E	K	I	P	A	R	V	E	K	K	I	E	L	T	E	D	G	F	I	A	K	Y	R	V	L	L	E	K	P	Y	K	A	L	F	G	V	E	I	N	L	A	V	H	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S								T	T												S	S	S														T	T											S	S																S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	M	E	K	P	E	E	F	E	A	K	E	F	E	V	N	D	P	Y	G	I	G	K	V	R	I	E	L	D	K	A	A	K	V	W	K	F	P	I	K	T	L	S	Q	S	E	A	G	W	D	F	I	Q	Q	G	V	S	Y	T	M	L	F	P	I	E	K	E	L	E	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T	T																									T	T																		S	S
	.	.	.	.	.	.
Sequence	V	R	F	R	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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