Fold library entry viewer: c1js4B_

Added to library: Tue Mar 16 13:04:36 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	P	A	F	N	Y	A	E	A	L	Q	K	S	M	F	F	Y	E	A	Q	R	S	G	K	L	P	E	N	N	R	V	S	W	R	G	D	S	G	L	N	D	G	A	D	V	G	L	D	L	T	G	G	W	Y	D	A	G	D	H	V	K	F	G	F	P	M	A	F	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																T	B		B	S			T	T				T	T				B		T	T	T	T	G	G	G	T	S					S	B			S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	M	L	A	W	G	A	I	E	S	P	E	G	Y	I	R	S	G	Q	M	P	Y	L	K	D	N	L	R	W	V	N	D	Y	F	I	K	A	H	P	S	P	N	V	L	Y	V	Q	V	G	D	G	D	A	D	H	K	W	W	G	P	A	E	V	M	P	M	E	R	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T																			T		S	B	T	T	B						S							T			S		G	G	G			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	K	V	D	P	S	C	P	G	S	D	V	A	A	E	T	A	A	A	M	A	A	S	S	I	V	F	A	D	D	D	P	A	Y	A	A	T	L	V	Q	H	A	K	Q	L	Y	T	F	A	D	T	Y	R	G	V	Y	S	D	C	V	P	A	G	A	F	Y	N	S	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B	T	T	B																					T	T	T																						S				G	G	G	T	S	T	T							S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	Y	Q	D	E	L	V	W	G	A	Y	W	L	Y	K	A	T	G	D	D	S	Y	L	A	K	A	E	Y	E	Y	D	F	L	S	T	E	Q	Q	T	D	L	R	S	Y	R	W	T	I	A	W	D	D	K	S	Y	G	T	Y	V	L	L	A	K	E	T	G	K	Q	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																												G	G	G	S		B		T	T	S	S		B			S	S			S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	D	D	A	N	R	W	L	D	Y	W	T	V	G	V	N	G	Q	R	V	P	Y	S	P	G	G	M	A	V	L	D	T	W	G	A	L	R	Y	A	A	N	T	A	F	V	A	L	V	Y	A	K	V	I	D	D	P	V	R	K	Q	R	Y	H	D	F	A	V	R	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T		B	T	T	B				B		T	T	S		B				S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	Y	A	L	G	D	N	P	R	N	S	S	Y	V	V	G	F	G	N	N	P	P	R	N	P	H	H	R	T	A	H	G	S	W	T	D	S	I	A	S	P	A	E	N	R	H	V	L	Y	G	A	L	V	G	G	P	G	S	P	N	D	A	Y	T	D	D	R	Q	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		S	T	T					B	T	T	S	S	S	S			S			B						T		S	S	S		S	S	S	S	S	S		S	S			T	T		B					S	S	T	T							T	T		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	A	N	E	V	A	T	D	Y	N	A	G	F	S	S	A	L	A	M	L	V	E	E	Y	G	G	T	P	L	A	D	F	P	P	T	E	E	P	D	G	P	E	I	F	V	E	A	Q	I	N	T	P	G	T	T	F	T	E	I	K	A	M	I	R	N	Q	S	G	W	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	B			T	G	G	G																				S	S		S						S	S		S												S	S														T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	R	M	L	D	K	G	T	F	R	Y	W	F	T	L	D	E	G	V	D	P	A	D	I	T	V	S	S	A	Y	N	Q	C	A	T	P	E	D	V	H	H	V	S	G	D	L	Y	Y	V	E	I	D	C	T	G	E	K	I	F	P	G	G	Q	S	E	H	R	R	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B		S											T	T			G	G	G						S		B	S	S				S							T	T									T	T			B		S	S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Sequence	Q	F	R	I	A	G	G	P	G	W	D	P	S	N	D	W	S	F	Q	G	I	G	N	E	L	A	P	A	P	Y	I	V	L	Y	D	D	G	V	P	V	W	G	T	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			G	G	G		T	T	T	T	T			S	S					T	T	S					T	T					S

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PDB structure

FASTA sequence

Hidden Markov model

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