Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1jn5B_

Fold library idPDB HeaderMoleculeTitle
c1jn5B_PDB header: transport proteinChain: B: PDB Molecule: tap;PDBTitle: structural basis for the recognition of a nucleoporin fg-2 repeat by the ntf2-like domain of tap-p15 mrna export3 factor


Added to library: Tue Mar 16 14:28:07 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIARSSLAEYFKDSRNVK
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)






B
SSTSS
GGGGGGT





S

TTB

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAF
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) T


TSSTTS


GGG

SS

SGGGTT
 .........150.........160.........170.........180..
Sequence TRTFIAVPASNSGLCIVNDELFVRNASSEEIQRAFAMPAPTP
Predicted secondary structure

















SS confidence









































Known secondary structure (DSSP)
TTSS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D