Fold library entry viewer: c1jmuD_

Added to library: Tue Mar 16 12:43:37 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	G	G	V	P	W	I	A	I	G	D	E	T	S	V	T	S	P	G	A	L	R	R	M	T	S	K	D	I	D	E	P	L	V	V	V	T	E	H	A	I	A	N	F	T	K	A	E	M	A	L	E	F	N	R	E	F	L	D	K	L	R	V	L	S	V	S	P	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B						S	S	S	S	S				S	G	G	G					B	G	G	G				B																					T	T							T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	D	L	L	T	Y	V	D	C	Y	V	G	V	S	A	R	Q	A	L	N	N	F	Q	K	Q	V	P	V	I	T	P	T	R	Q	T	M	Y	V	D	S	I	Q	A	A	L	K	A	L	E	K	W	E	I	D	L	R	V	A	Q	T	L	L	P	T	N	V	P	I	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S						T																																										T	T				S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	S	C	P	M	Q	S	V	V	K	L	L	D	D	Q	L	P	D	D	S	L	I	R	R	Y	P	K	E	A	A	V	A	L	A	K	R	N	G	G	I	Q	W	M	D	V	S	E	G	T	V	M	N	E	A	V	N	A	V	A	A	S	A	L	A	P	S	A	S	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S		T	T		G	G	G	T											T	T		T	T						T	T	T								S									S		B	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	L	E	E	K	S	K	L	T	E	Q	A	M	D	L	V	T	A	A	E	P	E	I	I	A	S	L	V	P	V	P	A	P	V	F	A	I	P	P	K	P	A	D	Y	N	V	R	T	L	K	I	D	E	A	T	W	L	R	M	I	P	K	T	M	G	T	L	F	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T		S	S																		T	T	T	S		T	T	T		T	T						S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	V	T	D	N	T	G	T	N	W	H	F	N	L	R	G	G	T	R	V	V	N	L	D	Q	I	A	P	M	R	F	V	L	D	L	G	G	K	S	Y	K	E	T	S	W	D	P	N	G	K	K	V	G	F	I	V	F	Q	S	K	I	P	F	E	L	W	T	A	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S									T	T							T	T	S		S								T	T					B	T	T	B			T	T											S	S		G	G	G			S	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	I	G	Q	A	T	V	V	N	Y	V	Q	L	Y	A	E	D	S	S	F	T	A	Q	S	I	I	A	T	T	S	L	A	Y	N	Y	E	P	E	Q	L	N	K	T	D	P	E	M	N	Y	Y	L	L	A	T	F	I	D	S	A	A	I	T	P	T	N	M	T	Q	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		B																S	S	T	T																						S	T	T											B	S	S				T	T	T				S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	W	D	A	L	L	T	M	S	P	L	S	A	G	E	V	T	V	K	G	A	V	V	S	E	V	V	P	A	E	L	I	G	S	Y	T	P	E	S	L	N	A	S	L	P	N	D	A	A	R	C	M	I	D	R	A	S	K	I	A	E	A	I	K	I	D	D	D	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S							S		S	S					T	T				S								T	T		B								S		T	T	B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	D	E	Y	S	P	N	S	V	P	I	Q	G	Q	L	A	I	S	Q	L	E	T	G	Y	G	V	R	I	F	N	P	K	G	I	L	S	K	I	A	S	R	A	M	Q	A	F	I	G	D	P	S	T	I	I	T	Q	A	A	P	V	L	S	D	K	N	N	W	I	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T				T	T	T											T	T	S			S	S																									G	G	G	G	G	B	T	T		T	T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Sequence	A	Q	G	V	K	T	S	L	R	T	K	S	L	S	A	G	V	K	T	A	V	S	K	L	S	S	S	E	S	I	Q	N	W	T	Q	G	F	L	D	K	V	S	T	H	F	P	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			S																																S

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PDB structure

FASTA sequence

Hidden Markov model

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