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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1jlxB_

Fold library idPDB HeaderMoleculeTitle
c1jlxB_PDB header: lectinChain: B: PDB Molecule: agglutinin;PDBTitle: agglutinin in complex with t-disaccharide


Added to library: Tue Mar 16 12:39:12 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGLPVIMCLKSNNHQKYLRYQSDNIQQYGLLQFSADKILDPLAQFEVEPSKTYDGLVHIKSRYTNKYLVR
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Known secondary structure (DSSP)

S
STTT



SSSTTTTBSSTT
TT


SSSTT
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence WSPNHYWITASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVGGSFVSYLFAESSQ
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Known secondary structure (DSSP) SSTT

BSS



TTSTT


SSTT
TTTTTT

BTTB
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDTGSKDVFHVIDWKSIFQFPKGYVTFKGNNGKYLGVITINQLPCLQFGYDNLNDPKVAHQMFVTSNGTI
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Known secondary structure (DSSP)

TT
TT
GGGGG


SS
TTS
TT

TT
GGG

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence CIKSNYMNKFWRLSTDDWILVDGNDPRETNEAAALFRSDVHDFNVISLLNMQKTWFIKRFTSGKPGFINC
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Known secondary structure (DSSP) TTTT
GGGB



GGG
TTTTTT

SSTT

S
 .........290.........
Sequence MNAATQNVDETAILEIIEL
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Known secondary structure (DSSP) SS

GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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