Fold library entry viewer: c1jibA_

Added to library: Tue Mar 16 12:07:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	L	E	A	I	F	H	E	A	K	G	S	Y	A	Y	P	I	S	E	T	Q	L	R	V	R	L	R	A	K	K	G	D	V	V	R	C	E	V	L	Y	A	D	R	Y	A	S	P	E	E	E	L	A	H	A	L	A	G	K	A	G	S	D	E	R	F	D	Y	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G		B			S	S	T	T	T						T	T										T	T	T		S									T	T			S	S	S														S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	L	E	C	S	T	K	R	V	K	Y	V	F	L	L	T	G	P	Q	G	E	A	V	Y	F	G	E	T	G	F	S	A	E	R	S	K	A	G	V	F	Q	Y	A	Y	I	H	R	S	E	V	F	T	T	P	E	W	A	K	E	A	V	I	Y	Q	I	F	P	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S											T	T								T	T				S	S	T	T	T	T										G	G	G	S									T								G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	A	N	G	D	P	S	N	D	P	P	G	T	E	Q	W	A	K	D	A	R	P	R	H	D	S	F	Y	G	G	D	L	K	G	V	I	D	R	L	P	Y	L	E	E	L	G	V	T	A	L	Y	F	T	P	I	F	A	S	P	S	H	H	K	Y	D	T	A	D	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T	T	T			T	T						T	T					T	T													T								T		S											S	S	S	S			S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	I	D	P	Q	F	G	D	L	P	T	F	R	R	L	V	D	E	A	H	R	R	G	I	K	I	I	L	D	A	V	F	N	H	A	G	D	Q	F	F	A	F	R	D	V	L	Q	K	G	E	Q	S	R	Y	K	D	W	F	F	I	E	D	F	P	V	S	K	T	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T															T	T	T										S	B			T	T	S										G	G	G		T	T	G	G	G	S		B		S	S	S				S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	N	Y	E	T	F	A	V	Q	V	P	A	M	P	K	L	R	T	E	N	P	E	V	K	E	Y	L	F	D	V	A	R	F	W	M	E	Q	G	I	D	G	W	R	L	N	V	A	N	E	V	D	H	A	F	W	R	E	F	R	R	L	V	K	S	L	N	P	D	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	B		B	S	S	S	S		T	T		B	B			T	T	S																T	T	T							T	T	G	G	G	S																	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	V	G	E	I	W	H	D	A	S	G	W	L	M	G	D	Q	F	D	S	V	M	N	Y	L	F	R	E	S	V	I	R	F	F	A	T	G	E	I	H	A	E	R	F	D	A	E	L	T	R	A	R	M	L	Y	P	E	Q	A	A	Q	G	L	W	N	L	L	D	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			T	T	T	T	T	T	T	S		S			B													T	S			S														T	T	S						T	T					S			T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	T	E	R	F	L	T	S	C	G	G	N	E	A	K	F	R	L	A	V	L	F	Q	M	T	Y	L	G	T	P	L	I	Y	Y	G	D	E	I	G	M	A	G	A	T	D	P	D	C	R	R	P	M	I	W	E	E	K	E	Q	N	R	G	L	F	E	F	Y	K	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S							T	T	T													T	T	S	S	S						T	T	G	G	G	T					S	T	T	T	T								G	G	G	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	R	L	R	H	R	L	A	S	L	T	R	G	N	V	R	S	W	H	A	D	K	Q	A	N	L	Y	A	F	V	R	T	V	Q	D	Q	H	V	G	V	V	L	N	N	R	G	E	K	Q	T	V	L	L	Q	V	P	E	S	G	G	K	T	W	L	D	C	L	T	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T														T	T	T	T									T	T										S	S	S										T	T	S		S					T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Sequence	E	V	H	G	K	Q	G	Q	L	K	L	T	L	R	P	Y	Q	G	M	I	L	W	N	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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