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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1izlM_

Fold library idPDB HeaderMoleculeTitle
c1izlM_PDB header: photosynthesisChain: M: PDB Molecule: photosystem ii: subunit psbc;PDBTitle: crystal structure of photosystem ii


Added to library: Thu Jan 10 04:14:39 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence INLSGKLLGAHVAHAGLIVFWAGAMTLFELAHFIPEKPMYEQGLILIPHIATLGWGVDTFPFFVVGVVHL
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Known secondary structure (DSSP)

SSSGGGTTTTTTTTT


SS

SSS
TTTTTS



TTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISSAVLGFGGVYHAIRGPETLWKDKNKMTTILGFHLIVLGIGALLLVAKAMFFLYDTWAPGGGDVRVIKS
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Known secondary structure (DSSP) TTTGGGTTSS





S
S


STTTSTTTTTTTT



SSSS









 .........150.........160.........170.........180.........190.........200.........210
Sequence PFGGEGWIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTGWARRAFIWSGEAYLSYSLGALSMMGFIATC
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Known secondary structure (DSSP) S
SS

S


SS
TTTTTTT

S



SS
SS


TTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FVWFNNTVYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTTSSS
TTS

TTTTTTTTT





SSSS
TTS



TT


S

TT


SS
 .........290.........300.........310.........320.........330.........340.......
Sequence XXXXXXXXXXXXXXXXXVGGVATEINSVNFVSPRSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFE
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Known secondary structure (DSSP) STTTTTS
SS





SSSSS

S



STTTTTTTTTTTSTTTTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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