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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1izlC_

Fold library idPDB HeaderMoleculeTitle
c1izlC_PDB header: photosynthesisChain: C: PDB Molecule: photosystem ii: subunit psbc;PDBTitle: crystal structure of photosystem ii


Added to library: Thu Jan 10 00:37:02 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLLGAHVAHAGLIVFWAGAMTLFELAHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPFFVVGVV
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Known secondary structure (DSSP)

STT


SS

SSS
TTTTTSS
SSS


SSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HLISSAVLGFGGVYHAIRGPETLEEYWKDKNKMTTILGFHLIVLGIGALLLVAKAMFFGGLYDTWAPGGG
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Known secondary structure (DSSP) TTTTTTTTTTSS
S






S
S


STTTTTGGGS


S
SSSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence DVRVIKSPFGGEGWIVSVNNLEDVVGGHIWIGLICIAGGIWHIARRAFIWSGEAYLSYSLGALSMMGFIA
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Known secondary structure (DSSP)






S
SS

S


SS
TTSS




SS

STTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TCFVWFNNTVYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TTSSSS
SSS

TTTTT





SSSS
TTS



TT


S

TT


 .........290.........300.........310.........320.........330.........340.........
Sequence XXXXXXXXXXXXXXXXXXXVGGVATEINSVNFVSPRSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFE
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Known secondary structure (DSSP) SSSTTTTTS
SS





SSSSS

S



STTTTTTTTTTTGGGTTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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