Fold library entry viewer: c1iyjB_

Added to library: Tue Mar 16 12:47:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	P	Q	F	N	K	D	L	M	S	S	L	Q	N	A	R	D	L	Q	D	I	R	I	K	N	K	E	R	H	H	L	C	P	Q	P	G	S	L	Y	L	T	K	S	S	T	L	P	R	I	S	L	Q	A	A	V	G	D	S	V	P	S	A	C	S	P	K	Q	L	Y	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T																				T	T	S								S	S	T	T	T	T	S	S		S										T	S								S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	G	V	S	K	A	C	I	S	V	N	S	K	N	A	E	Y	F	Q	F	A	I	E	D	H	F	G	K	E	A	L	C	A	G	K	G	F	R	L	A	D	G	G	W	L	I	P	S	D	D	G	K	A	G	K	E	E	F	Y	R	A	L	C	D	T	P	G	V	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T			T	T	G	G	G			T	T	T	T	T	T			B								T	T	T	S	S	S	T	T					G	G	G							T	T	S		B											T	S	T	T			G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	L	I	S	S	V	W	V	S	N	H	Y	R	W	I	V	W	K	L	A	A	M	E	F	A	F	P	K	E	F	A	N	R	C	L	N	P	E	R	V	L	L	Q	L	K	Y	R	Y	D	V	E	I	D	N	S	S	R	S	A	L	K	K	I	L	E	R	D	D	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G																								S	T	T	T	T	T	T	T	S	S	S																T	T	S											T	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	K	T	L	V	L	C	V	S	D	I	I	S	L	S	K	V	D	T	I	E	L	T	D	G	W	Y	A	V	K	A	Q	L	D	P	P	L	L	A	L	V	K	S	G	R	L	T	V	G	Q	K	I	I	T	Q	G	A	E	L	V	G	S	P	D	A	C	A	P	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																						S	S																		T		S		T	T						S						S			S				G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	P	D	S	L	R	L	K	I	S	A	N	S	T	R	P	A	R	W	H	S	K	L	G	F	F	H	D	P	R	P	F	P	L	P	L	S	S	L	F	S	D	G	G	N	V	G	C	V	D	V	I	V	Q	R	V	Y	P	L	Q	W	V	E	K	T	V	S	G	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S							T	T	T						S	S	S		S				S			S						T	T				T	T	S				S				B															S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	F	R	N	E	R	E	E	E	K	E	A	L	R	F	S	R	D	V	S	T	V	W	K	L	R	V	T	S	Y	K	K	R	E	K	S	A	L	L	S	I	W	R	P	S	S	D	L	P	S	L	L	T	E	G	Q	R	Y	R	I	Y	H	L	S	V	S	K	S	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													B	S	S	S	S										S			T	T	T	T	T	T			T	T							S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	F	E	W	P	S	I	Q	L	T	A	T	K	R	T	Q	Y	Q	Q	L	P	V	S	S	E	T	L	L	Q	L	Y	Q	P	R	E	L	L	P	F	S	K	L	S	D	P	A	F	Q	P	P	C	S	E	V	D	V	V	G	V	V	V	S	V	V	K	P	I	G	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S									T	T														T	T	T									G	G	G	G	G		T	T				G	G	G															S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	L	V	Y	L	S	D	E	C	L	H	L	L	V	V	K	F	G	I	D	L	N	E	D	I	K	P	R	V	L	I	A	A	S	N	L	Q	W	R	P	E	S	T	S	R	V	P	T	L	F	A	G	N	F	S	V	F	S	A	S	P	K	E	A	H	F	Q	E	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T									S	S				S	S			T	T														T	T		S	S													S	S		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Sequence	T	N	M	K	H	A	I	E	N	I	D	T	F	Y	K	E	A	E	K	K	L	I	Q	V	L	K	G	D	S	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T												T	T

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PDB structure

FASTA sequence

Hidden Markov model

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