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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1iqrA_

Fold library idPDB HeaderMoleculeTitle
c1iqrA_PDB header: lyaseChain: A: PDB Molecule: photolyase;PDBTitle: crystal structure of dna photolyase from thermus2 thermophilus


Added to library: Tue Mar 16 12:22:56 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPLLVWHRGDLRLHDHPALLEALARGPVVGLVVLDPNNLKTTPRRRAWFLENVRALREAYRARGGALWVL
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Known secondary structure (DSSP)

SS


STT
TTS

SS
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence EGLPWEKVPEAARRLKAKAVYALTSHTPYGRYRDGRVREALPVPLHLLPAPHLLPPDLPRAYRVYTPFSR
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Known secondary structure (DSSP) S
T
S


S
SS




SS
TT
SS

SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence LYRGAAPPLPPPEALPKGPEEGEIPREDPGLPLPEPGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSR
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Known secondary structure (DSSP) T










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SS




STGGGTT
TT
TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence LSPYFALGVLSPRLAAWEAERRGGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQAFPWQEDEAL
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Known secondary structure (DSSP)
TTSS

S
GGGGTS
SSGGGTT





 .........290.........300.........310.........320.........330.........340.........350
Sequence FQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRAVNLQGW
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Known secondary structure (DSSP) T
SS
S


TS



TT

 .........360.........370.........380.........390.........400.........410.....
Sequence QWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPEYPSYAPKDPVVDLEEARRRYLRLARD
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Known secondary structure (DSSP) TTSSGGG

TT



T
TTS
TT
SSSS
SS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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