Fold library entry viewer: c1iokE_

Added to library: Tue Mar 16 12:42:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	K	E	V	K	F	N	S	D	A	R	D	R	M	L	K	G	V	N	I	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	I	D	K	S	F	G	A	P	R	I	T	K	D	G	V	S	V	A	K	E	I	E	L	S	D	K	F	E	N	M	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											G	G	G		S	T	T									S	S	S	S																	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	M	V	R	E	V	A	S	R	T	N	D	E	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	V	R	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	V	A	T	A	K	V	V	E	A	I	K	S	A	A	R	P	V	N	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	G		S	T																						T	T																							T	T		B				S	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	E	V	A	Q	V	G	T	I	S	A	N	G	E	S	F	I	G	Q	Q	I	A	E	A	M	Q	R	V	G	N	E	G	V	I	T	V	E	E	N	K	G	M	E	T	E	V	E	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	V	T	N	A	D	K	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T						T	T	T	T																	T	T	S								S	S	S													S				S		G	G	G				S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	A	E	L	E	D	A	Y	I	L	L	H	E	K	K	L	S	S	L	Q	P	Q	K	P	L	L	I	V	A	E	D	V	E	I	A	A	V	K	A	P	G	F	G	D	R	R	K	A	M	L	Q	D	I	A	I	L	T	G	G	I	D	M	L	G	R	A	K	K	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S		B														S		B								S			T	T														T			T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	N	K	D	N	T	T	I	V	D	G	A	G	E	K	A	E	I	E	A	R	V	S	Q	I	R	Q	Q	I	E	E	T	T	S	D	Y	D	R	E	K	L	Q	E	R	V	A	K	L	A	G	G	V	A	V	I	R	V	G	G	M	T	E	I	E	V	K	E	R	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S						S																				T	T				S	S											T	T	S	S										S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	V	D	D	A	L	N	A	T	R	A	A	V	Q	E	G	I	V	V	G	G	G	V	A	L	V	Q	G	A	K	V	L	E	G	L	S	G	A	N	S	D	Q	D	A	G	I	A	I	I	R	R	A	L	E	A	P	M	R	Q	I	A	E	N	A	G	V	D	G	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	T							G	G	G	G	G	S				S	S														T	T											T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Sequence	V	A	G	K	V	R	E	S	S	D	K	A	F	G	F	N	A	Q	T	E	E	Y	G	D	M	F	K	F	G	V	I	D	P	A	K	V	V	R	T	A	L	E	D	A	A	S	V	A	G	L	L	I	T	T	E	A	M	I	A	E	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			S	T	T					T	T	T	T									T																								T

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PDB structure

FASTA sequence

Hidden Markov model

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