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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1iicA_

Fold library idPDB HeaderMoleculeTitle
c1iicA_PDB header: transferaseChain: A: PDB Molecule: peptide n-myristoyltransferase;PDBTitle: crystal structure of saccharomyces cerevisiae n-2 myristoyltransferase with bound myristoylcoa


Added to library: Tue Mar 16 12:28:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENY
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Known secondary structure (DSSP)

S

TTGGGSS


TT


SS
SS



GGGS
SS




TT

TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCV
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Known secondary structure (DSSP) SS
GGG




STT

GGGTTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTE
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Known secondary structure (DSSP)
GGGTTSS
TTT


SS

S

SSSTTSS


TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence EDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFS
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Known secondary structure (DSSP)


SS


TT

GGGTTSS


S

TT

GGG

 .........290.........300.........310.........320.........330.........340.........350
Sequence YVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYD
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Known secondary structure (DSSP)
TTS



S
SS
S

TTTTSS
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVV
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Known secondary structure (DSSP) TT
SS
TTGGGTTTTTT
T




BSB
TTSSB
TTT
B
B


 ..
Sequence ML
Predicted secondary structure
SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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