Fold library entry viewer: c1i8qA_

Added to library: Tue Mar 16 12:09:07 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	E	H	P	Q	P	V	T	T	Q	I	E	K	S	V	N	T	A	L	N	K	N	Y	V	F	N	K	A	D	Y	Q	Y	T	L	T	N	P	S	L	G	K	I	V	G	G	I	L	Y	P	N	A	T	G	S	T	T	V	K	I	S	D	K	S	G	K	I	I	K	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S					T	T	S					S	S	T	T	S					S	S	G	G	G					T	T						S											T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	L	S	V	T	A	S	T	E	D	N	F	T	K	L	L	D	K	W	N	D	V	T	I	G	N	Y	V	Y	D	T	N	D	S	N	M	Q	K	L	N	Q	K	L	D	E	T	N	A	K	N	I	E	A	I	K	L	D	S	N	R	T	F	L	W	K	D	L	D	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S														T		G	G	G			T	T																										T	T		S		S	S	G	G	G			T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	N	S	A	Q	L	T	A	T	Y	R	R	L	E	D	L	A	K	Q	I	T	N	P	H	S	T	I	Y	K	N	E	K	A	I	R	T	V	K	E	S	L	A	W	L	H	Q	N	F	Y	N	V	N	K	D	I	E	G	S	A	N	W	W	D	F	E	I	G	V	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																			T		T	T	S	T	T	T	T																			T	S	S	T	T					S	S								T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	I	T	G	T	L	S	L	M	N	N	Y	F	T	D	A	E	I	K	T	Y	T	D	P	I	E	H	F	V	P	D	A	E	Y	F	R	K	T	L	V	N	P	F	K	A	L	G	G	N	L	V	D	M	G	R	V	K	I	I	E	G	L	L	R	K	D	N	T	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	S	S																			T	T			S	T	T	T	T							T																	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	K	T	S	H	S	L	K	N	L	F	T	T	A	T	K	A	E	G	F	Y	A	D	G	S	Y	I	D	H	T	N	V	A	Y	T	G	A	Y	G	N	V	L	I	D	G	L	T	Q	L	L	P	I	I	Q	E	T	D	Y	K	I	S	N	Q	E	L	D	M	V	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	S				S	S	S	S				T	T	S					T	T	T				T	T	T																	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	W	I	N	Q	S	F	L	P	L	I	V	K	G	E	L	M	D	M	S	R	G	R	S	I	S	R	E	A	A	S	S	H	A	A	A	V	E	V	L	R	G	F	L	R	L	A	N	M	S	N	E	E	R	N	L	D	L	K	S	T	I	K	T	I	I	T	S	N	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	G	G	G			T	T				G	G	G	S	G	G	G	G	G		T	T	S																		T	T			S																		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	N	V	F	N	N	L	K	S	Y	S	D	I	A	N	M	N	K	L	L	N	D	S	T	V	A	T	K	P	L	K	S	N	L	S	T	F	N	S	M	D	R	L	A	Y	Y	N	A	K	K	D	F	G	F	A	L	S	L	H	S	K	R	T	L	N	Y	E	G	M	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G			S												T		T	T	S													G	G	G	T							T	T	T	T										T	T	S	B	S				B	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	E	N	T	R	G	W	Y	T	G	D	G	M	F	Y	I	Y	N	S	D	Q	S	H	Y	S	N	H	F	W	P	T	V	N	P	Y	K	M	A	G	T	T	E	K	D	A	K	R	E	D	T	T	K	E	F	M	S	K	H	S	K	D	A	K	E	K	T	G	Q	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B		T	T		T	T	T	T	S	S							S		T	T	T	T	S	S	S					S		S	S	S		T	T													T	T	T	T	T	T	S	T	T	S	T	T	T	T	T	T			B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	T	S	D	F	V	G	S	V	K	L	N	D	H	F	A	L	A	A	M	D	F	T	N	W	D	R	T	L	T	A	Q	K	G	W	V	I	L	N	D	K	I	V	F	L	G	S	N	I	K	N	T	N	G	I	G	N	V	S	T	T	I	D	Q	R	K	D	D	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S							S	S	S	S											T	T	S	S											T	T												S	S	S		S													S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	P	Y	T	T	Y	V	N	G	K	T	I	D	L	K	Q	A	S	S	Q	Q	F	T	D	T	K	S	V	F	L	E	S	K	E	P	G	R	N	I	G	Y	I	F	F	K	N	S	T	I	D	I	E	R	K	E	Q	T	G	T	W	N	S	I	N	R	T	S	K	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							T	T						S	S	S																S	S	T	T																												B	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	I	V	S	N	P	F	I	T	I	S	Q	K	H	D	N	K	G	D	S	Y	G	Y	M	M	V	P	N	I	D	R	T	S	F	D	K	L	A	N	S	K	E	V	E	L	L	E	N	S	S	K	Q	Q	V	I	Y	D	K	N	S	Q	T	W	A	V	I	K	H	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S										S											S	S		S								S	S							T	T	T	T								S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.
Sequence	Q	E	S	L	I	N	N	Q	F	K	M	N	K	A	G	L	Y	L	V	Q	K	V	G	N	D	Y	Q	N	V	Y	Y	Q	P	Q	T	M	T	K	T	D	Q	L	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T	T					S										S	S	S								T	T	T	T					S

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PDB structure

FASTA sequence

Hidden Markov model

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