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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1hygA_

Fold library idPDB HeaderMoleculeTitle
c1hygA_PDB header: oxidoreductaseChain: A: PDB Molecule: l-lactate/malate dehydrogenase;PDBTitle: crystal structure of mj0490 gene product, the family of2 lactate/malate dehydrogenase


Added to library: Tue Mar 16 12:30:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR
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Known secondary structure (DSSP)
TTTSSTT


GGGTTS



TT
GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence IIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVITNPVDVMTYKALVDSKFER
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Known secondary structure (DSSP) GGTT
S






SS





SSST

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRIIGEHGDSMVPLLSATSIGGIPIQKFERFKELPIDEI
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Known secondary structure (DSSP) TT
TTT

GGG

B
SSTT

GGG
TTGGG
GGGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence IEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGI
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Known secondary structure (DSSP) T
TTTSSS
STT

B

SSSBTTB
S

TT
 .........290.........300.........310...
Sequence EEVVSIELDKDEIIAFRKSAEIIKKYCEEVKNL
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Known secondary structure (DSSP)








T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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