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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1hbuD_

Fold library idPDB HeaderMoleculeTitle
c1hbuD_PDB header: methanogenesisChain: D: PDB Molecule: methyl-coenzyme m reductase i alpha subunit;PDBTitle: methyl-coenzyme m reductase in the mcr-red1-silent state in2 complex with coenzyme m


Added to library: Tue Mar 16 13:58:51 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADKLFINALKKKFEESPEEKKTTFYTLGGWKQSERKTEFVNAGKEVAAKRGIPQYNPDIGTPLGQRVLMP
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Known secondary structure (DSSP)


TT
SS
TT





S
S
GGGG
TS



TTSSS
S
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence YQVSTTDTYVEGDDLHFVNNAAMQQMWDDIRRTVIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMP
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Known secondary structure (DSSP) BTTSS
GGGGSGGG
TSTT




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GAAVVQEHMVETHPALVADSYVKVFTGNDEIADEIDPAFVIDINKQFPEDQAETLKAEVGDGIWQVVRIP
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Known secondary structure (DSSP) T

SS
SS




TTTTTT
S
S
GGGB

S
TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence TIVSRTCDGATTSRWSAMQIGMSMISAYKQAAGEAATGDFAYAAKAEVIHMGTYLPVRARGENEPGGVPF
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Known secondary structure (DSSP) S
TTT

TT




SS

B



B
SSSGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GYLADICQSSRVNYEDPVRVSLDVVATGAMLYDQIWLGSYMSGGVGFTQYATAAYTDNILDDFTYFGKEY
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Known secondary structure (DSSP) S
STT
TT




TS
TT

TTTBTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VEDKYGLCEAPNNMDTVLDVATEVTFYGLEQYEEYPALLEDQFGGSRAAVVAAAAGCSTAFATGNAQTGL
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Known secondary structure (DSSP) T
TT
S
SS
S
S


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence SGWYLSMYLHKEQHSRLGFYYDLQDQGASNVFSIRGDEGLPLELRGPNYPNYAMNVGHQGEYAGISQAPH
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Known secondary structure (DSSP) T

S



TTT

S

STTT


GGG

TTSGGGSS
SSS
 .........500.........510.........520.........530.........540...
Sequence AARGDAFVFNPLVKIAFADDNLVFDFTNVRGEFAKGALREFEPAGERALITPA
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Known secondary structure (DSSP) T
S
SS
T

TTSSS
TT
TT



S


GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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