Fold library entry viewer: c1h6zA_

Added to library: Tue Mar 16 12:10:22 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	A	K	K	W	V	Y	Y	F	G	G	G	N	A	D	G	N	K	N	M	K	E	L	L	G	G	K	G	A	N	L	A	E	M	V	N	L	G	I	P	V	P	P	G	F	T	I	T	T	E	A	C	K	T	Y	Q	E	T	E	T	I	P	Q	E	V	A	D	Q	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S		S			T	T																		T	T															T	T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	N	V	S	R	V	E	K	E	M	G	A	K	F	G	D	P	A	N	P	L	L	F	S	V	R	S	G	A	A	A	S	D	T	V	L	N	L	G	L	N	K	V	T	V	D	A	W	V	R	R	A	P	R	L	E	R	F	V	Y	D	S	Y	R	R	F	I	T	M	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B	T	T		T	T	S	B								S		T	T						S	B	S										G	G	G		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	D	I	V	M	Q	V	G	R	E	D	F	E	E	A	L	S	R	M	K	E	R	R	G	T	K	F	D	T	D	L	T	A	S	D	L	K	E	L	C	D	G	Y	L	E	L	F	E	L	K	T	G	C	S	F	P	Q	D	P	V	M	Q	L	F	A	A	I	K	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	T	T	T	S	T	T	T								S		S		G	G	G												T	T								S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	R	S	W	G	N	P	R	A	T	I	Y	R	R	M	N	N	I	T	G	L	L	G	T	A	V	N	V	Q	A	M	V	F	G	N	I	N	D	R	S	A	T	G	V	A	F	S	R	S	P	S	T	G	E	N	F	F	F	G	E	Y	L	V	N	A	Q	G	E	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T		T	T	T	T	T					S				S														S		S	S	T	T								S	S		S	S	S			S	S								S			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	A	G	I	R	T	P	Q	Q	I	N	H	S	L	S	L	R	W	A	K	A	H	G	V	G	E	E	E	R	R	K	R	Y	P	S	M	E	E	A	M	P	E	N	Y	R	L	L	C	D	V	R	K	R	L	E	N	H	Y	R	D	M	Q	D	L	E	F	T	V	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S					S	S									T	T	S	S										S							S																			T	S										T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	R	L	W	L	L	Q	C	R	N	G	K	R	T	I	H	A	A	V	R	I	A	I	D	M	V	N	E	G	L	I	S	R	E	E	A	V	L	R	I	D	P	Y	Q	V	D	H	L	M	H	P	N	L	E	P	G	A	E	K	A	N	K	P	I	G	R	G	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																												T	S	S								T	S		G	G	G	G	G	G	G	G						T	T	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	P	G	A	A	V	G	Q	V	V	F	D	A	E	S	A	K	E	W	S	G	R	G	K	K	V	I	M	V	R	L	E	T	S	P	E	D	L	A	G	M	D	A	A	C	G	I	L	T	A	R	G	G	M	T	S	H	A	A	V	V	A	R	G	M	G	K	C	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S									S	S						S	T	T	T	T	S								S	S			G	G	G		T	T	T	T	T	S	S					S	S			T	T										T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	G	C	G	D	M	V	I	R	G	K	S	F	K	L	N	G	S	V	F	R	E	G	D	Y	I	T	I	D	G	S	K	G	L	I	Y	A	G	K	L	K	L	R	S	P	D	L	K	G	S	F	Q	T	I	L	Q	W	C	Q	E	M	K	R	L	G	V	R	T	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T				S	S	S					T	T				S	S							T	T	S				S										S		S	T	T															S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	T	P	A	D	A	A	K	A	R	S	F	G	A	E	G	V	G	L	C	R	T	E	H	M	F	F	E	G	S	R	I	N	F	I	R	E	M	I	L	A	D	S	A	S	G	R	K	A	A	L	D	K	L	L	P	I	Q	R	A	D	F	V	G	I	L	R	A	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									T	T	T			S					B		S	G	G	G	S	T	T	T										S		S	S																								T	T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	L	P	V	T	I	R	L	L	D	P	P	L	H	E	F	V	P	H	D	A	A	A	Q	F	E	L	A	Q	K	L	G	M	P	A	E	K	V	R	N	R	V	N	A	L	H	E	L	N	P	M	L	G	H	R	G	C	R	L	G	I	T	Y	P	E	I	Y	N	M	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									S		G	G	G	G			S	S		S	S	T	T	T	T	S		S	S	S												S	S			S	S	S	T	T	S	S									S	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	R	A	I	I	E	A	A	I	A	V	S	E	E	G	S	S	V	I	P	E	I	M	V	P	L	V	G	K	K	E	E	L	S	L	I	R	E	E	V	V	K	T	A	E	A	V	I	T	K	S	G	K	R	V	H	Y	T	V	G	T	M	I	E	V	P	R	A	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T														S																						S		S												S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	T	A	D	S	I	A	Q	K	A	D	F	F	S	F	G	T	N	D	L	T	Q	M	G	C	G	F	S	R	D	D	A	G	P	F	L	R	H	Y	G	N	L	G	I	Y	A	Q	D	P	F	Q	S	I	D	Q	E	G	I	G	E	L	V	R	I	A	V	T	K	G	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T	T	T		S						T	T								T			G	G	G						T	T	T	T	T	T		S	S	S	S		T	T	T	S			T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.
Sequence	V	K	P	M	L	K	M	G	I	C	G	E	H	G	G	D	P	A	T	I	G	F	C	H	K	V	G	L	D	Y	V	S	C	S	P	F	R	V	P	V	A	I	V	A	A	A	H	A	S	I	K	D	R	R	A	A	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T							S	G	G	G	G												T		S						G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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