Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1h4tD_

Fold library idPDB HeaderMoleculeTitle
c1h4tD_PDB header: aminoacyl-trna synthetaseChain: D: PDB Molecule: prolyl-trna synthetase;PDBTitle: prolyl-trna synthetase from thermus thermophilus complexed2 with l-proline


Added to library: Tue Mar 16 12:21:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPM
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)




TTT
TTS
SSTT

TT




SG
 .........80.........90.........100.........110.........120.........130.........140
Sequence SFLFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRT
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) GG


SS

TT
S



BGGG




SS
BTTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence SEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) SSS





GGGS
TT
S
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIV
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TTT

TTS

T
BTTB

TTT
S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence PIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


TTTTTT




TTS

S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SRLGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFKEAVQEGFALAFHCGDKACE
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) TTS
TTTTT
SSTTTS




 .........430.........440.........450.........460.....
Sequence RLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAYP
Predicted secondary structure





























SS confidence












































Known secondary structure (DSSP)

SS

B


B
TTT
SB

TTB

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D