PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1h28B_

Fold library id	PDB Header	Molecule	Title
c1h28B_	PDB header: cell cycle	Chain: B: PDB Molecule: cyclin a2;	PDBTitle: cdk2/cyclin a in complex with an 11-residue recruitment2 peptide from p107

Links to external resources
Added to library: Tue Mar 16 11:56:03 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V P D Y H E D I H T Y L R E M E V K C K P K V G Y M K K Q P D I T N S M R A I L V D W L V E V G E E Y K L Q N E T L H L A V N Y I D R F L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
T T
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S M S V L R G K L Q L V G T A A M L L A S K F E E I Y P P E V A E F V Y I T D D T Y T K K Q V L R M E H L V L K V L T F D L A A P T V N Q F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T T
S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L T Q Y F L H Q Q P A N C K V E S L A M F L G E L S L I D A D P Y L K Y L P S V I A G A A F H L A L Y T V T G Q S W P E S L I R K T G Y T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
T T T T S S
S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . .

Sequence E S L K P C L M D L H Q T Y L K A P Q H A Q Q S I R E K Y K N S K Y H G V S L L N P P E T L N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G S S
T T S T T T T T G G G S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	P	D	Y	H	E	D	I	H	T	Y	L	R	E	M	E	V	K	C	K	P	K	V	G	Y	M	K	K	Q	P	D	I	T	N	S	M	R	A	I	L	V	D	W	L	V	E	V	G	E	E	Y	K	L	Q	N	E	T	L	H	L	A	V	N	Y	I	D	R	F	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G																			T	T						T	T																				T	T																	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	M	S	V	L	R	G	K	L	Q	L	V	G	T	A	A	M	L	L	A	S	K	F	E	E	I	Y	P	P	E	V	A	E	F	V	Y	I	T	D	D	T	Y	T	K	K	Q	V	L	R	M	E	H	L	V	L	K	V	L	T	F	D	L	A	A	P	T	V	N	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																									S	S											T	T	T		S																T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	T	Q	Y	F	L	H	Q	Q	P	A	N	C	K	V	E	S	L	A	M	F	L	G	E	L	S	L	I	D	A	D	P	Y	L	K	Y	L	P	S	V	I	A	G	A	A	F	H	L	A	L	Y	T	V	T	G	Q	S	W	P	E	S	L	I	R	K	T	G	Y	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S		T	T																					T	T	T	T	S	S																			S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Sequence	E	S	L	K	P	C	L	M	D	L	H	Q	T	Y	L	K	A	P	Q	H	A	Q	Q	S	I	R	E	K	Y	K	N	S	K	Y	H	G	V	S	L	L	N	P	P	E	T	L	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	G	G	G	S	S								T	T	S	T	T	T	T	T	G	G	G	S				S