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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1gygA_

Fold library idPDB HeaderMoleculeTitle
c1gygA_PDB header: hydrolaseChain: A: PDB Molecule: phospholipase c;PDBTitle: r32 closed form of alpha-toxin from clostridium perfringens2 strain cer89l43


Added to library: Tue Mar 16 11:59:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WDGKIDGTGTHAMIVTQGVSILENDLSKNEPESVRKNLEILKENMHELQLGSTYPDYDKNAYDLYQDHFW
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Known secondary structure (DSSP)



TTS
S

TTS
TGGGT
S



S





 .........80.........90.........100.........110.........120.........130.........140
Sequence DPDTDNNFSKDNSWYLAYSIPDTGESQIRKFSALARYEWQRGNYKQATFYLGEAMHYFGDIDTPYHPANV
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Known secondary structure (DSSP)
TTSSSSS
TTB
B


TT
TS



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TAVDSAGHVKFETFAEERKEQYKINTVGCKTNEDFYADILKNKDFNAWSKEYARGFAKTGKSIYYSHASM
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Known secondary structure (DSSP)


STT


TGGGG

S

SS
TTS


TTST
 .........220.........230.........240.........250.........260.........270.........280
Sequence SHSWDDWDYAAKVTLANSQKGTAGYIYRFLHDVSEGNDPSVGKNVKELVAYISTSGEKDAGTDDYMYFGI
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Known secondary structure (DSSP) TS
TT

TTTT





STT
S

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence KTKDGKTQEWEMDNPGNDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKYTAFPDAYKPENIKVIANGK
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Known secondary structure (DSSP) TTS



SS

S
TT

S
TT

GGG
SSSS


B
TT
 .........360.........370
Sequence VVVDKDINEWISGNSTYNIK
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Known secondary structure (DSSP)



B
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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