PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1gygA_

Fold library id	PDB Header	Molecule	Title
c1gygA_	PDB header: hydrolase	Chain: A: PDB Molecule: phospholipase c;	PDBTitle: r32 closed form of alpha-toxin from clostridium perfringens2 strain cer89l43

Links to external resources
Added to library: Tue Mar 16 11:59:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence W D G K I D G T G T H A M I V T Q G V S I L E N D L S K N E P E S V R K N L E I L K E N M H E L Q L G S T Y P D Y D K N A Y D L Y Q D H F W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
T T S
T G G G T
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D P D T D N N F S K D N S W Y L A Y S I P D T G E S Q I R K F S A L A R Y E W Q R G N Y K Q A T F Y L G E A M H Y F G D I D T P Y H P A N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S S S
T T B
B
T T
T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T A V D S A G H V K F E T F A E E R K E Q Y K I N T V G C K T N E D F Y A D I L K N K D F N A W S K E Y A R G F A K T G K S I Y Y S H A S M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T G G G G
S
S S
T T S
T T S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S H S W D D W D Y A A K V T L A N S Q K G T A G Y I Y R F L H D V S E G N D P S V G K N V K E L V A Y I S T S G E K D A G T D D Y M Y F G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
T T T T
S T T
S
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence K T K D G K T Q E W E M D N P G N D F M T G S K D T Y T F K L K D E N L K I D D I Q N M W I R K R K Y T A F P D A Y K P E N I K V I A N G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
S
T T
S
T T
G G G
S S S S
B
T T

. . . . . . . . . 360 . . . . . . . . . 370

Sequence V V V D K D I N E W I S G N S T Y N I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	W	D	G	K	I	D	G	T	G	T	H	A	M	I	V	T	Q	G	V	S	I	L	E	N	D	L	S	K	N	E	P	E	S	V	R	K	N	L	E	I	L	K	E	N	M	H	E	L	Q	L	G	S	T	Y	P	D	Y	D	K	N	A	Y	D	L	Y	Q	D	H	F	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		S																			T	T	S														T										G	G	G	T		S					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	P	D	T	D	N	N	F	S	K	D	N	S	W	Y	L	A	Y	S	I	P	D	T	G	E	S	Q	I	R	K	F	S	A	L	A	R	Y	E	W	Q	R	G	N	Y	K	Q	A	T	F	Y	L	G	E	A	M	H	Y	F	G	D	I	D	T	P	Y	H	P	A	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T							S	S	S	S	S		T	T	B		B																					T	T																				T	S					S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	A	V	D	S	A	G	H	V	K	F	E	T	F	A	E	E	R	K	E	Q	Y	K	I	N	T	V	G	C	K	T	N	E	D	F	Y	A	D	I	L	K	N	K	D	F	N	A	W	S	K	E	Y	A	R	G	F	A	K	T	G	K	S	I	Y	Y	S	H	A	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T												T	G	G	G	G			S			S	S		T	T	S																																		T	T	S	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	H	S	W	D	D	W	D	Y	A	A	K	V	T	L	A	N	S	Q	K	G	T	A	G	Y	I	Y	R	F	L	H	D	V	S	E	G	N	D	P	S	V	G	K	N	V	K	E	L	V	A	Y	I	S	T	S	G	E	K	D	A	G	T	D	D	Y	M	Y	F	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																																	T	T			T	T	T	T															S	T	T		S			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	T	K	D	G	K	T	Q	E	W	E	M	D	N	P	G	N	D	F	M	T	G	S	K	D	T	Y	T	F	K	L	K	D	E	N	L	K	I	D	D	I	Q	N	M	W	I	R	K	R	K	Y	T	A	F	P	D	A	Y	K	P	E	N	I	K	V	I	A	N	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S										S	S			S		T	T										S		T	T			G	G	G											S	S	S	S				B										T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Sequence	V	V	V	D	K	D	I	N	E	W	I	S	G	N	S	T	Y	N	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B		S	S