Fold library entry viewer: c1gviA_

Added to library: Tue Mar 16 12:35:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	K	E	A	I	H	H	R	S	T	D	N	F	A	Y	A	Y	D	S	E	T	L	H	L	R	L	Q	T	K	K	N	D	V	D	H	V	E	L	L	F	G	D	P	Y	E	W	H	D	G	A	W	Q	F	Q	T	M	P	M	R	K	T	G	S	D	G	L	F	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T		B			S	S	G	G	G				S	S	S	S										T	T	T		S									T	T				T	T																S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	L	A	E	V	K	P	P	Y	R	R	L	R	Y	G	F	V	L	R	A	G	G	E	K	L	V	Y	T	E	K	G	F	Y	H	E	A	P	S	D	D	T	A	Y	Y	F	C	F	P	F	L	H	R	V	D	L	F	Q	A	P	D	W	V	K	D	T	V	W	Y	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S											T	T							T	T				S	S				S		S	T	T	S								S	S	S						G	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	P	E	R	F	A	N	G	N	P	A	I	S	P	K	G	A	R	P	W	G	S	E	D	P	T	P	T	S	F	F	G	G	D	L	Q	G	I	I	D	H	L	D	Y	L	A	D	L	G	I	T	G	I	Y	L	T	P	I	F	R	A	P	S	N	H	K	Y	D	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T				S					S	S			S				S	S				S	S													T								T										B	S		S	S	S	S	T	T	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	Y	F	E	I	D	P	H	F	G	D	K	E	T	L	K	T	L	V	K	R	C	H	E	K	G	I	R	V	M	L	D	A	V	F	N	H	C	G	Y	E	F	A	P	F	Q	D	V	L	K	N	G	A	A	S	R	Y	K	D	W	F	H	I	R	E	F	P	L	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	B		T	T	T																	T										S	B			T	T											G	G	G		T	T	G	G	G	B		B	S	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	P	R	P	N	Y	D	T	F	A	F	V	P	H	M	P	K	L	N	T	A	H	P	E	V	K	R	Y	L	L	D	V	A	T	Y	W	I	R	E	F	D	I	D	G	W	R	L	D	V	A	N	E	I	D	H	Q	F	W	R	E	F	R	Q	A	V	K	A	L	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S		S	B		B	S	S	S		T	T	S	B	B	B		T	T	S																		S								T	T	G	G	G	S																	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	V	Y	I	L	G	L	I	W	H	D	A	M	P	W	L	R	G	D	Q	F	D	A	V	M	N	Y	P	L	A	D	A	A	L	R	F	F	A	K	E	D	M	S	A	S	E	F	A	D	R	L	M	H	V	L	H	S	Y	P	K	Q	V	N	E	A	A	F	N	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	S			T	T	T	T	T	T	T	S		S			B													T	S			S														T	T	S							T		B		B	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	S	H	D	T	P	R	L	L	T	V	C	G	G	D	V	R	K	V	K	L	L	F	L	F	Q	L	T	F	T	G	S	P	C	I	Y	Y	G	D	E	I	G	M	T	G	G	N	D	P	E	C	R	K	C	M	V	W	D	P	E	K	Q	N	K	E	L	Y	E	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S								T	T														T	S	S	S						T	T	G	G	G	T					S	T	T	G	G	G							T	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	Q	L	I	A	L	R	K	Q	Y	R	A	L	R	R	G	D	V	A	F	L	T	A	D	D	E	V	N	H	L	V	Y	A	K	T	D	G	N	E	T	V	M	I	I	I	N	R	S	N	E	A	A	E	I	P	M	P	I	D	A	R	G	K	W	L	V	N	L	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T							S	B			B				S	S		T	T									T	T										S	S	S										T	T							T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Sequence	G	E	R	F	A	A	E	A	E	T	L	C	V	S	L	P	P	Y	G	F	V	L	Y	A	V	E	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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