Fold library entry viewer: c1gqkB_

Added to library: Tue Mar 16 12:02:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	D	G	Y	D	M	W	L	R	Y	Q	P	I	A	D	Q	T	L	L	K	T	Y	Q	K	Q	I	R	H	L	H	V	A	G	D	S	P	T	I	N	A	A	A	A	E	L	Q	R	G	L	S	G	L	L	N	K	P	I	V	A	R	D	E	K	L	K	D	Y	S	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T	T	T							S													S								S																		T	T	S							S	S			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	G	T	P	D	N	S	P	L	I	A	S	L	N	L	G	E	R	L	Q	A	L	G	A	E	G	Y	L	L	E	Q	T	R	I	N	K	R	H	V	V	I	V	A	A	N	S	D	V	G	V	L	Y	G	S	F	H	L	L	R	L	I	Q	T	Q	H	A	L	E	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T						T	T			T					T	T	T	T	T										T	T									S	S																	T	T				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	S	S	A	P	R	L	Q	H	R	V	V	N	H	W	D	N	L	N	R	V	V	E	R	G	Y	A	G	L	S	L	W	D	W	G	S	L	P	N	Y	L	A	P	R	Y	T	D	Y	A	R	I	N	A	S	L	G	I	N	G	T	V	I	N	N	V	N	A	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S								B		T	T	S		B	T	T			S		S		S			G	G	G	T	T	T															T	T	T							S		S	S			G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	V	L	S	D	Q	F	L	Q	K	I	A	A	L	A	D	A	F	R	P	Y	G	I	K	M	Y	L	S	I	N	F	N	S	P	R	A	F	G	D	V	D	T	A	D	P	L	D	P	R	V	Q	Q	W	W	K	T	R	A	Q	K	I	Y	S	Y	I	P	D	F	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S															G	G	G	T									T	T					T	T	S		S				T	T	S																			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	L	V	K	A	D	S	E	G	Q	P	G	P	Q	G	Y	G	R	D	H	A	E	G	A	N	M	L	A	A	A	L	K	P	F	G	G	V	V	F	W	R	A	F	V	Y	H	P	D	I	E	D	R	F	R	G	A	Y	D	E	F	M	P	L	D	G	K	F	A	D	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	B	T	T	B			G	G	G	G	T															G	G	G	T												T	T	S	S		G	G	G							G	G	G	T	T		S		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	I	L	Q	I	K	N	G	P	I	D	F	Q	P	R	E	P	F	S	A	L	F	A	G	M	S	R	T	N	M	M	M	E	F	Q	I	T	Q	E	Y	F	G	F	A	T	H	L	A	Y	Q	G	P	L	F	E	E	S	L	K	T	E	T	H	A	R	G	E	G	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S	S	S	S		S	S					T						S	S	S									S		T	T	T	T	T	T	T	S													T		B			T	T	S	T	T		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	G	N	I	L	E	G	K	V	F	K	T	R	H	T	G	M	A	G	V	I	N	P	G	T	D	R	N	W	T	G	H	P	F	V	Q	S	S	W	Y	A	F	G	R	M	A	W	D	H	Q	I	S	A	A	T	A	A	D	E	W	L	R	M	T	F	S	N	Q	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	T		S												S	S	T	T	S	S	S	S	T	T															T	T															T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	I	E	P	V	K	Q	M	M	L	V	S	R	E	A	G	V	N	Y	R	S	P	L	G	L	T	H	L	Y	S	Q	G	D	H	Y	G	P	A	P	W	T	D	D	L	P	R	A	D	W	T	A	V	Y	Y	H	R	A	S	K	T	G	I	G	F	N	R	T	K	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T			T	T					B		T	T	T		S	S	B		T	T					S	S	G	G	G	S	S								S	S							S	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	N	A	L	A	Q	Y	P	E	P	I	A	K	A	W	G	D	L	N	S	V	P	E	D	L	I	L	W	F	H	H	L	S	W	D	H	R	M	Q	S	G	R	N	L	W	Q	E	L	V	H	K	Y	Y	Q	G	V	E	Q	V	R	A	M	Q	R	T	W	D	Q	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		G	G	G	G	S										S	T	T	T	S		T	T	T	G	G	G	T					T	T		B		T	T	S		B																									T	T	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	Y	V	D	A	A	R	F	A	Q	V	K	A	L	L	Q	V	Q	E	R	E	A	V	R	W	R	N	S	C	V	L	Y	F	Q	S	V	A	G	R	P	I	P	A	N	Y	E	Q	P	E	H	D	L	E	Y	Y	K	M	L	A	R	T	T	Y	V	P	E	P	W	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S																																								T	T	S				S	S												S					S	S	S	G
	.	.	.	.	.	.	.	.
Sequence	A	S	S	S	R	V	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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