Fold library entry viewer: c1gpeA_

Added to library: Tue Mar 16 12:39:31 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	L	P	A	Q	Q	I	D	V	Q	S	S	L	L	S	D	P	S	K	V	A	G	K	T	Y	D	Y	I	I	A	G	G	G	L	T	G	L	T	V	A	A	K	L	T	E	N	P	K	I	K	V	L	V	I	E	K	G	F	Y	E	S	N	D	G	A	I	I	E	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	S	B			G	G	G	T	T	T											S												T	S	T	T								S	S				T	T	S							G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	A	Y	G	Q	I	F	G	T	T	V	D	Q	N	Y	L	T	V	P	L	I	N	N	R	T	N	N	I	K	A	G	K	G	L	G	G	S	T	L	I	N	G	D	S	W	T	R	P	D	K	V	Q	I	D	S	W	E	K	V	F	G	M	E	G	W	N	W	D	N	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T	T	T	T	T	S	T	T	B									T	T	S								B		S	T	T	G	G	G	G	T	S																		T	T			T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	E	Y	M	K	K	A	E	A	A	R	T	P	T	A	A	Q	L	A	A	G	H	S	F	N	A	T	C	H	G	T	N	G	T	V	Q	S	G	A	R	D	N	G	Q	P	W	S	P	I	M	K	A	L	M	N	T	V	S	A	L	G	V	P	V	Q	Q	D	F	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T														T					G	G	G			B	S	S	S				B					S	S		B		T												T	T			B	S			T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	H	P	R	G	V	S	M	I	M	N	N	L	D	E	N	Q	V	R	V	D	A	A	R	A	W	L	L	P	N	Y	Q	R	S	N	L	E	I	L	T	G	Q	M	V	G	K	V	L	F	K	Q	T	A	S	G	P	Q	A	V	G	V	N	F	G	T	N	K	A	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											S	B		T	T			B								T	T	T	T	T	T		T	T						S												T	T													T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	D	V	F	A	K	H	E	V	L	L	A	A	G	S	A	I	S	P	L	I	L	E	Y	S	G	I	G	L	K	S	V	L	D	Q	A	N	V	T	Q	L	L	D	L	P	V	G	I	N	M	Q	D	Q	T	T	T	T	V	S	S	R	A	S	S	A	G	A	G	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		T	T	T								T	T										T	T				S					T	T		S	B	B													G	G	G		S	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	A	V	F	F	A	N	F	T	E	T	F	G	D	Y	A	P	Q	A	R	D	L	L	N	T	K	L	D	Q	W	A	E	E	T	V	A	R	G	G	F	H	N	V	T	A	L	K	V	Q	Y	E	N	Y	R	N	W	L	L	D	E	D	V	A	F	A	E	L	F	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G											S											T	T	S		S																			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	E	G	K	I	N	F	D	L	W	D	L	I	P	F	T	R	G	S	V	H	I	L	S	S	D	P	Y	L	W	Q	F	A	N	D	P	K	F	F	L	N	E	F	D	L	L	G	Q	A	A	A	S	K	L	A	R	D	L	T	S	Q	G	A	M	K	E	Y	F	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									S	S					B					S	S	S		G	G	G	T								T	T	S	S																			T	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	T	L	P	G	Y	N	L	V	Q	N	A	T	L	S	Q	W	S	D	Y	V	L	Q	N	F	R	P	N	W	H	A	V	S	S	C	S	M	M	S	R	E	L	G	G	V	V	D	A	T	A	K	V	Y	G	T	Q	G	L	R	V	I	D	G	S	I	P	P	T	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	G	G	G	S		T	T													S					S			B		T	T		B	S		G	G	G	T		S	B		T	T		B	B	T	T		B	S					S	T	T			S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Sequence	S	S	H	V	M	T	I	F	Y	G	M	A	L	K	V	A	D	A	I	L	D	D	Y	A	K	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S																						T

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PDB structure

FASTA sequence

Hidden Markov model

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