Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1gl9B_

Fold library idPDB HeaderMoleculeTitle
c1gl9B_PDB header: topoisomeraseChain: B: PDB Molecule: reverse gyrase;PDBTitle: archaeoglobus fulgidus reverse gyrase complexed with adpnp


Added to library: Tue Mar 16 12:30:15 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPVVYPVCGGLESKEIEKHKRSLCLFPEDFLLKEFVEFFRKCVGEPRAIQKMWAKRILRKESFAATAPTG
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)









S






SS

TTT
S

TT




BT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQ
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) S
TTT

SSTTT



TTT
S


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NLRNFKIVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKNVDKLLHLLGFHYDLKTKSWVGEARGCLM
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TTTS
SSSSS


SS
STST


BTTTTB





S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VSTATAKKGKKAELFRQLLNFDIGSSRITVRNVEDVAVNDESISTLSSILEKLGTGGIIYARTGEEAEEI
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
BSS


TTTS



BS






S


TTTTTTS
S
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YESLKNKFRIGIVTATKKGDYEKFVEGEIDHLIGTAHYYGTLVRGLDLPERIRFAVFVGCPSFRVTIEDI
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TTSSSSS


B
SSS


TTS
S
TGGGT

TTT

S


TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DSLSPQMVKLLAYLYRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQ
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) SSS
GGGSS

TTTTSS
STT
SSSSS




SSSB
SSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence GSGRTSRLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRRQEF
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TT

TT



S
TTSS




S
S
TGGGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence DLIKPALFIVESPTKARQISRFFGKPSVKVLDGAVVYEIPMQKYVLMVTASIGHVVDLITNRGFHGVLVN
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)



SSTTS

B

TT


SS


S
S
SSSTBTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence GRFVPVYASIKVDNSRSRIEALRKLAHDAEFVIVGTDPDTEGEKIAWDLKNLLSGCGAVKRAEFHEVTRR
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT





TS


SSTTTTS


SS
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence AILEALESLRDVDENLVKAQVVRRIEDRWIGFVLSQKLWERFNNRNLSAGRAQTLVLGWIIDRFQESRER
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) TTS
B


TT

SS



STTS

 .........710.........720.........730.........740.........750.........760.........770
Sequence RKIAIVRDFDLVLEHDEEEFDLTIKLVEEREELRTPLPPYTTETMLSDANRILKFSVKQTMQIAQELFEN
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)



SSS

S


S











TS


T
 .........780.........790.........800.........810.........820.........830.........840
Sequence GLITYHRTDSTRVSDVGQRIAKEYLGDDFVGREWGESGAHECIRPTRPLTRDDVQRLIQEGVLVVEGLRW
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP) TSBS
SS






SSSB







SS




BSSS

TSS

SS

 .........850.........860.........870.........880.........890.........900.........910
Sequence EHFALYDLIFRRFMASQCRPFKVVVKKYSIEFDGKTAEEERIVRAEGRAYELYRAVWVKNELPTGTFRVK
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) B

TTS


S










 .........920.........930.........940.........950.........960.........970.........980
Sequence AEVKSVPKVLPFTQSEIIQMMKERGIGRPSTYATIVDRLFMRNYVVEKYGRMIPTKLGIDVFRFLVRRYA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)






SS



T


TTTTTSTT
 .........990.........1000.........1010.........1020
Sequence KFVSEDRTRDLESRMDAIERGELDYLKALEDMYAEIKSID
Predicted secondary structure









SS confidence







































Known secondary structure (DSSP)
TT
S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D