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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1ghwH_ | PDB header: blood clotting | Chain: H: PDB Molecule: thrombin; | PDBTitle: a novel serine protease inhibition motif involving a multi-2 centered short hydrogen bonding network at the active site |
Added to library: Tue Mar 16 13:32:07 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | I | V | E | G | S | D | A | E | I | G | M | S | P | W | Q | V | M | L | F | R | K | S | P | Q | E | L | L | C | G | A | S | L | I | S | D | R | W | V | L | T | A | A | H | C | L | L | Y | P | P | W | D | K | N | F | T | E | N | D | L | L | V | R | I | G | K | H | S | R | T | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | ![]() | ![]() | T | T | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | G | G | G | T | ![]() | ![]() | G | G | G | T | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Y | E | R | N | I | E | K | I | S | M | L | E | K | I | Y | I | H | P | R | Y | N | W | R | E | N | L | D | R | D | I | A | L | M | K | L | K | K | P | V | A | F | S | D | Y | I | H | P | V | C | L | P | D | R | E | T | A | A | S | L | L | Q | A | G | Y | K | G | R | V | T | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | T | T | T | T | B | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | W | G | N | L | K | E | T | G | Q | P | S | V | L | Q | V | V | N | L | P | I | V | E | R | P | V | C | K | D | S | T | R | I | R | I | T | D | N | M | F | C | A | G | Y | K | P | D | E | G | K | R | G | D | A | C | E | G | D | S | G | G | P | F | V | M | K | S | P | F | N | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | B | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | T | T | ![]() | ![]() | ![]() | ![]() | G | G | G | S | B | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Sequence | R | W | Y | Q | M | G | I | V | S | W | G | E | G | C | D | R | D | G | K | Y | G | F | Y | T | H | V | F | R | L | K | K | W | I | Q | K | V | I | D | Q | F | ||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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