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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1gdhA_

Fold library idPDB HeaderMoleculeTitle
c1gdhA_PDB header: oxidoreductase(choh (d)-nad(p)+ (a))Chain: A: PDB Molecule: d-glycerate dehydrogenase;PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution


Added to library: Tue Mar 16 13:33:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKC
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TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence ISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELV
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 .........150.........160.........170.........180.........190.........200.........210
Sequence GEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNA
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 .........220.........230.........240.........250.........260.........270.........280
Sequence PSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPN
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Known secondary structure (DSSP)


TTTTT
BSTTS
TT
S
GGGB
TSS

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TTGGG
TT
 .........290.........300.........310.........320
Sequence TFLFPHIGSAATQAREDMAHQANDLIDALFGGADMSYALA
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Known secondary structure (DSSP)
SS
TT
STTS

TTB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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