Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1g5gA_

Fold library idPDB HeaderMoleculeTitle
c1g5gA_PDB header: viral proteinChain: A: PDB Molecule: fusion protein;PDBTitle: fragment of fusion protein from newcastle disease virus


Added to library: Tue Mar 16 12:29:04 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DGRPLAAAGIVVTGDKAVNIYTSSQTGSIIIKLLPNMPKDKEACAKAPLEAYNRTLTTLLTPLGDSIRRI
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)

SGGGTTT

S


SS



SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence QESGLSQLAVAVGKMQQFVNDQFNKTAQELDCIKITQQVGVELNLYLTELTTVFGPQITSPALTQLTIQA
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)


SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence LYNLAGGNMDYLLTKLGVGNNQLSSLISSGLITGNPILYDSQTQLLGIQVTLPSVGNLNNMRATYLETLS
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTT
S

GGGT
S
TTTTB





 .........220.........230.........240.........250.........260.........270.........280
Sequence VSTTKGFASALVPKVVTQVGSVIEELDTSYCIETDLDLYCTRIVTFPMSPGIYSCLSGNTSACMYSKTEG
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

TT
TT





SSTT


GGG
SSS





TT
STT







 .........290.........300.........310.........320.........330.........340.........350
Sequence ALTTPYMTLKGSVIANCKMTTCRCADPPGIISQNYGEAVSLIDRQSCNILSLDGITLRLSGEFDATYQKN
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TT

S
SSS
TTTS

B
SSS
SB



TTT
SB


TTT
SB


SS


B











 .......
Sequence ISIQDSQ
Predicted secondary structure



SS confidence






Known secondary structure (DSSP)







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D