Fold library entry viewer: c1fpvA_

Added to library: Tue Mar 16 14:11:49 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	V	G	I	S	T	G	T	F	N	N	Q	T	E	F	K	F	L	E	N	G	W	V	E	I	T	A	N	S	S	R	L	V	H	L	N	M	P	E	S	E	N	Y	K	R	V	V	V	N	N	M	D	K	T	A	V	K	G	N	M	A	L	D	D	I	H	V	E	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S															S	S	S																		S		S	S									T	T	T	S	S	S	S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	P	W	S	L	V	D	A	N	A	W	G	V	W	F	N	P	G	D	W	Q	L	I	V	N	T	M	S	E	L	H	L	V	S	F	E	Q	E	I	F	N	V	V	L	K	T	V	S	E	S	A	T	Q	P	P	T	K	V	Y	N	N	D	L	T	A	S	L	M	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	T	T	T																																						S	S	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	D	S	N	N	T	M	P	F	T	P	A	A	M	R	S	E	T	L	G	F	Y	P	W	K	P	T	I	P	T	P	W	R	Y	Y	F	Q	W	D	R	T	L	I	P	S	H	T	G	T	S	G	T	P	T	N	V	Y	H	G	T	D	P	D	D	V	Q	F	Y	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S					T	T	T	T	S		S			S		T	T	S		B																				S	S			S											T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	N	S	V	P	V	H	L	L	R	T	G	D	E	F	A	T	G	T	F	F	F	D	C	K	P	C	R	L	T	H	T	W	Q	T	N	R	A	L	G	L	P	P	F	L	N	S	L	P	Q	S	E	G	A	T	N	F	G	D	I	G	V	Q	Q	D	K	R	R	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S							T	T																			B					S	S	S	S	S						S				S	S			T	T							S		G	G	G			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	Q	M	G	N	T	D	Y	I	T	E	A	T	I	M	R	P	A	E	V	G	Y	S	A	P	Y	Y	S	F	E	A	S	T	Q	G	P	F	K	T	P	I	A	A	G	R	G	G	A	Q	T	D	E	N	Q	A	A	D	G	D	P	R	Y	A	F	G	R	Q	H	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S		S	S						T	T	T	B			S	S			S		B			T	T						S	S													S	S	T	T				T	T	T	T	T								S	S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	T	T	T	T	G	E	T	P	E	R	F	T	Y	I	A	H	Q	D	T	G	R	Y	P	E	G	D	W	I	Q	N	I	N	F	N	L	P	V	T	N	D	N	V	L	L	P	T	D	P	I	G	G	K	T	G	I	N	Y	T	N	I	F	N	T	Y	G	P	L	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			S	S										S							T	T	S						T	T			S	S			G	G	G				S	S	S		S	S	S		S	S			S	T	T	T			B			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	N	N	V	P	P	V	Y	P	N	G	Q	I	W	D	K	E	F	D	T	D	L	K	P	R	L	H	I	N	A	P	F	V	C	Q	N	N	C	P	G	Q	L	F	V	K	V	A	P	N	L	T	N	Q	Y	D	P	D	A	S	A	N	M	S	R	I	V	T	Y	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B	T	T	S			B						S	S	S			S	S		S	S		S	B			S	S														B		S				T	T			S				B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Sequence	F	W	W	K	G	K	L	V	F	K	A	K	L	R	A	S	H	T	W	N	P	I	Q	Q	M	S	I	N	V	D	N	Q	F	N	Y	V	P	N	N	I	G	A	M	K	I	V	Y	E	K	S	Q	L	A	P	R	K	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	S	S									T	T	T	G	G	G	S	S			T	T								B		S			S	B

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PDB structure

FASTA sequence

Hidden Markov model

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