Fold library entry viewer: c1fokA_

Added to library: Tue Mar 16 12:43:41 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	I	R	T	F	G	W	V	Q	N	P	G	K	F	E	N	L	K	R	V	V	Q	V	F	D	R	N	S	K	V	H	N	E	V	K	N	I	K	I	P	T	L	V	K	E	S	K	I	Q	K	E	L	V	A	I	M	N	Q	H	D	L	I	Y	T	Y	K	E	L	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S				S													T	T		T	T	S									T																			T	T	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	T	S	I	R	S	E	A	P	C	D	A	I	I	Q	A	T	I	A	D	Q	G	N	K	K	G	Y	I	D	N	W	S	S	D	G	F	L	R	W	A	H	A	L	G	F	I	E	Y	I	N	K	S	D	S	F	V	I	T	D	V	G	L	A	Y	S	K	S	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	G	G	G					S						S			S	S		S	S	S	S																T	T	S					T	T	T	T														S		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	S	A	I	E	K	E	I	L	I	E	A	I	S	S	Y	P	P	A	I	R	I	L	T	L	L	E	D	G	Q	H	L	T	K	F	D	L	G	K	N	L	G	F	S	G	E	S	G	F	T	S	L	P	E	G	I	L	L	D	T	L	A	N	A	M	P	K	D	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													T	T											T	T	T												T	S	S	S		S	B	T	T	B														S	S		T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	I	R	N	N	W	E	G	S	S	D	K	Y	A	R	M	I	G	G	W	L	D	K	L	G	L	V	K	Q	G	K	K	E	F	I	I	P	T	P	D	N	K	E	F	I	S	H	A	F	K	I	T	G	E	G	L	K	V	L	R	R	A	K	G	S	V	P	K	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																			T	T	S																				S																T	T	T				B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	W	E	M	L	A	T	N	L	T	D	K	E	Y	V	R	T	R	R	A	L	I	L	E	I	L	I	K	A	G	S	L	K	I	E	Q	I	Q	D	N	L	K	K	L	G	F	D	E	V	I	E	T	I	E	N	D	I	K	G	L	I	N	T	G	I	F	I	E	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S		S	S		T	T																		S		S														T																		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	R	F	Y	Q	L	K	D	H	I	L	Q	F	V	I	P	N	R	G	V	T	K	Q	L	V	K	S	E	L	E	E	K	K	S	E	L	R	H	K	L	K	Y	V	P	H	E	Y	I	E	L	I	E	I	A	R	N	S	T	Q	D	R	I	L	E	M	K	V	M	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								B						T	T	T	T	S	G	G	G																		S	S	S		G	G	G	G						T	T		G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	M	K	V	Y	G	Y	R	G	K	H	L	G	G	S	R	K	P	D	G	A	I	Y	T	V	G	S	P	I	D	Y	G	V	I	V	D	T	K	A	Y	S	G	G	Y	N	L	P	I	G	Q	A	D	E	M	Q	R	Y	V	E	E	N	Q	T	R	N	K	H	I	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T									S	S	S	S		S						S	S	S	T	T												T	T																			T	T	S			T	T	S	S	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	E	W	W	K	V	Y	P	S	S	V	T	E	F	K	F	L	F	V	S	G	H	F	K	G	N	Y	K	A	Q	L	T	R	L	N	H	I	T	N	C	N	G	A	V	L	S	V	E	E	L	L	I	G	G	E	M	I	K	A	G	T	L	T	L	E	E	V	R	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		G	G	G	G	S		T	T											S				T	T	T	T											S																					S	S			S	S	T	T	T	T	T
	.	.	.	.	.	.	.	.
Sequence	F	N	N	G	E	I	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	B

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PDB structure

FASTA sequence

Hidden Markov model

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