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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1fl2A_

Fold library idPDB HeaderMoleculeTitle
c1fl2A_PDB header: oxidoreductaseChain: A: PDB Molecule: alkyl hydroperoxide reductase subunit f;PDBTitle: catalytic core component of the alkylhydroperoxide2 reductase ahpf from e.coli


Added to library: Tue Mar 16 13:27:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYD
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Known secondary structure (DSSP)


STTT


SSTTGGGGG



BTTBSSTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGP
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Known secondary structure (DSSP)
S



SSTT

TTS








TTTTTTBTTTS
GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGDG
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Known secondary structure (DSSP) GGBT


STTBS
SSSS

S
T
TTSSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTT
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Known secondary structure (DSSP) SSTTT


S
S
S
GGGTTTS
B
TTS
B


TT
B
SSTT
STTBS
 .........290.........300.........310
Sequence VPYKQIIIATGEGAKASLSAFDYLIRTKTA
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Known secondary structure (DSSP)
SS

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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