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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1fbvA_

Fold library idPDB HeaderMoleculeTitle
c1fbvA_PDB header: ligaseChain: A: PDB Molecule: signal transduction protein cbl;PDBTitle: structure of a cbl-ubch7 complex: ring domain function in2 ubiquitin-protein ligases


Added to library: Tue Mar 16 12:38:59 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPGTVDKKMVEKCWKLMDKVVRLCQNPKLALKNSPPYILDLLPDTYQHLRTILSRYEGKMETLGENEYFR
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Known secondary structure (DSSP)





T
GGG

TT
TT
TTT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELKGIFPSGLFQGDTFRITKADA
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Known secondary structure (DSSP) S
GGGSSSS
SGGGS

GGG


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AEFWRKAFGEKTIVPWKSFRQALHEVHPISSGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWSSLLR
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Known secondary structure (DSSP) TT
SS


S
TT
SST

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence NWNSLAVTHPGYMAFLTYDEVKARLQKFIHKPGSYIFRLSCTRLGQWAIGYVTADGNILQTIPHNKPLFQ
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Known secondary structure (DSSP) TTS
TTB
SS

GGGTTSTT
SSSTTS
TTS



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALIDGFREGFYLFPDGRNQNPDLTGLCEPTPQDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIEPC
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Known secondary structure (DSSP) TTS

TT
SS




SS
SSS







TTS

TTB
TTTSSSB


SSS
 .........360.........370.........380........
Sequence GHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPIVVDPF
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Known secondary structure (DSSP)


TT

S
TTT








SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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