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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1ej6D_

Fold library idPDB HeaderMoleculeTitle
c1ej6D_PDB header: virusChain: D: PDB Molecule: sigma2;PDBTitle: reovirus core


Added to library: Tue Mar 16 13:52:08 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARAAFLFKTVGFGGLQNVPINDELSSHLLRAGNSPWQLTQFLDWISLGRGLATSALVPTAGSRYYQMSCL
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Known secondary structure (DSSP)








SS
SS
S

TTT


S

TGGG
S



SS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSGTLQIPFRPNHRWGDIRFLRLVWSAPTLDGLVVAPPQVLAQPALQAQADRVYDCDDYPFLARDPRFKH
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Known secondary structure (DSSP) TTTTTSTT


SS

BTTSSTT




SS





SS
GGGSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RVYQQLSAVTLLNLTGFGPISYVRVDEDMWSGDVNQLLMNYFGHTFAEIAYTLCQASANRPWEHDGTYAR
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Known secondary structure (DSSP) SSSSS

GGG

GGGTT
BS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence MTQIILSLFWLSYVGVIHQQNTYRTFYFQCNRRGDAAEVWILSCSLNHSAQIRPGNRSLFVMPTSPDWNM
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Known secondary structure (DSSP) TTSSBTTBBBTTTTTTSSS



S
B



SS
SGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence DVNLILSSTLTGCLCSGSQLPLIDNNSVPAVSRNIHGWTGRAGNQLHGFQVRRMVTEFCDRLRRDGVMTQ
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Known secondary structure (DSSP)





GGGS
GGG

BTTTSS
B

TSS
 .........360.........370.........380.........390.........400.........410.......
Sequence AQQNQIEALADQTQQFKRDKLEAWAREDDQYNQANPNSTMFRTKPFTNAQWGRGNTGATSAAIAALI
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Known secondary structure (DSSP)
TTS


SS



GGGGS
SSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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