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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1ei1B_

Fold library idPDB HeaderMoleculeTitle
c1ei1B_PDB header: isomeraseChain: B: PDB Molecule: dna gyrase b;PDBTitle: dimerization of e. coli dna gyrase b provides a structural2 mechanism for activating the atpase catalytic center


Added to library: Tue Mar 16 13:18:11 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNSSDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSV
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Known secondary structure (DSSP)

S
SGGG




TTST

SSSSTT



TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIH
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Known secondary structure (DSSP)
SS



SB
TTTSSBSTT
SS
SSSSS
SS
S

SS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLDSGVSIRLRDKRDG
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Known secondary structure (DSSP) TTSS


S


TTT

S

S

STT
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTH
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Known secondary structure (DSSP)



STTTS
BS
SS
TTBSS


TT
TT
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence LAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQ
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Known secondary structure (DSSP) TTT



TT
SS

BSSTT

SB

 .........360.........370.........380.........390.
Sequence QMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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