Fold library entry viewer: c1ea9D_

Added to library: Tue Mar 16 14:37:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	F	L	E	A	V	Y	H	R	P	R	K	N	F	S	Y	A	Y	N	G	T	T	V	H	L	R	I	R	T	K	K	D	D	M	T	A	V	Y	A	L	A	G	D	K	Y	M	W	D	H	T	M	E	Y	V	P	M	T	K	L	A	T	D	E	L	F	D	Y	W	E	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G		B			S	B	T	T	T						T	T							B		B	T	T			S							B		T	T	S		T	T	T													S	S	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	V	T	P	P	Y	R	R	V	K	Y	G	F	L	L	Q	Q	G	H	E	K	R	W	M	T	E	Y	D	F	L	T	E	P	P	A	N	P	D	R	L	F	E	Y	P	F	I	N	P	V	D	V	F	Q	P	P	A	W	V	K	D	A	I	F	Y	Q	I	F	P	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G						B				S	S	S					B		S	S				S	S			S	S	S	S	S	S								G	G	G	S					T	T	T	T	S								G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	A	N	G	D	T	R	N	D	P	E	G	T	L	P	W	G	S	A	D	P	T	P	S	C	F	F	G	G	D	L	Q	G	V	I	D	H	L	D	H	L	S	K	L	G	V	N	A	V	Y	F	T	P	L	F	K	A	T	T	N	H	K	Y	D	T	E	D	Y	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S		S		S	S						S	S	S				S	S							S						T		T	T	T	T	T	T	T														S	S	S	T	T	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	D	P	Q	F	G	D	K	D	T	L	K	K	L	V	D	L	C	H	E	R	G	I	R	V	L	L	D	A	V	F	N	H	S	G	R	T	F	P	P	F	V	D	V	L	K	N	G	E	K	S	K	Y	K	D	W	F	H	I	R	S	L	P	L	E	V	V	D	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T															T	T	T										S	B			T	T	S										T	T	T		G	G	G	G	G	B		B	S	S	S	S				S	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	T	Y	D	T	F	A	F	E	P	L	M	P	K	L	N	T	E	H	P	D	V	K	E	Y	L	L	K	A	A	E	Y	W	I	R	E	T	G	I	D	G	W	R	L	D	V	A	N	E	V	S	H	Q	F	W	R	E	F	R	R	V	V	K	Q	A	N	P	D	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	B		B	S	S	S		T	T		B	B	B		T	T	S																			T							T	T	G	G	G	S																	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	L	G	E	V	W	H	E	S	S	I	W	L	E	G	D	Q	F	D	A	V	M	N	Y	P	F	T	N	A	V	L	D	F	F	I	H	Q	I	A	D	A	E	K	F	S	F	M	L	G	K	Q	L	A	G	Y	P	R	Q	A	S	E	V	M	F	N	L	L	D	S	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			S	G	G	G	S	S	S	S		S	S					T	T									S	S			S		T	T													S												S	S		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	T	A	R	L	L	T	Q	A	D	G	D	K	R	K	M	K	L	A	V	L	F	Q	F	T	Y	F	G	T	P	C	I	Y	Y	G	D	E	V	G	L	D	G	G	H	D	P	G	C	R	K	C	M	E	W	D	E	T	K	H	D	K	D	L	F	A	F	Y	Q	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S							T	T	S															S	S	S						T	T	T	T	T			S			S	T	T	S	S								T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	R	L	R	Q	A	H	A	A	L	R	T	G	T	F	K	F	L	T	A	E	K	N	S	R	Q	I	A	Y	L	R	E	D	D	Q	D	T	I	L	V	V	M	N	N	D	K	A	G	H	T	L	T	L	P	V	R	H	A	Q	W	T	H	L	W	Q	D	D	V	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T					S									T	T											T	T											T	T										S	S	S						S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Sequence	A	A	H	G	Q	L	T	V	K	L	P	A	Y	G	F	A	V	L	K	A	S	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S							T	T						B

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PDB structure

FASTA sequence

Hidden Markov model

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