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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1e9lA_

Fold library idPDB HeaderMoleculeTitle
c1e9lA_PDB header: macrophage secretory proteinChain: A: PDB Molecule: ym1 secretory protein;PDBTitle: the crystal structure of novel mammalian lectin ym12 suggests a saccharide binding site


Added to library: Tue Mar 16 13:54:05 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNEITYTHEQDLRDYEALNGLKDKNTELK
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Known secondary structure (DSSP)

GGGTTS
GGG


GGGS
TTT
SSSSS
SSTTGGGGT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKE
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Known secondary structure (DSSP) TTT
SSSTT
SS
SSSTT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence MRKAFEEESVEKDIPRLLLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYKS
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Known secondary structure (DSSP) TTS



SS


S




S
GGGSB


SS
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence PYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLL
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Known secondary structure (DSSP) TT

GGGGG
STT

GGGSS
TT

STT
B



TTT

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AYYEVCTFLNEGATEVWDAPQEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSF
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Known secondary structure (DSSP) TT
TTTTTT


TTTT

STGGGS
SSSSS
 .........360.........370..
Sequence CHQRHFPLTSTLKGDLNIHSAS
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Known secondary structure (DSSP) SSS
SSTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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