Fold library entry viewer: c1e8zA_

Added to library: Tue Mar 16 13:23:55 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	E	E	S	Q	A	F	Q	R	Q	L	T	A	L	I	G	Y	D	V	T	D	V	S	N	V	H	D	D	E	L	E	F	T	R	R	G	L	V	T	P	R	M	A	E	V	A	S	R	D	P	K	L	Y	A	M	H	P	W	V	T	S	K	P	L	P	E	Y	L	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S		T	T			T	T		S	S	S									T											S											B			S								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	I	A	N	N	C	I	F	I	V	I	H	R	S	T	T	S	Q	T	I	K	V	S	P	D	D	T	P	G	A	I	L	Q	S	F	F	T	K	M	A	K	D	F	V	L	R	V	C	G	R	D	E	Y	L	V	G	E	T	P	I	K	N	F	Q	W	V	R	H	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		T	T	S									S	S									T	T												T	T										T	T	S	S		B			S	S	S		G	G	G	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	N	G	E	E	I	H	V	V	L	D	T	P	P	D	P	A	L	D	E	V	R	K	E	E	C	D	R	K	F	R	V	K	I	R	G	I	D	I	P	V	L	P	R	N	T	D	L	T	V	F	V	E	A	N	I	Q	H	G	Q	Q	V	L	C	Q	R	R	T	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T													G	G	G	G									S												S					S	S													T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	P	F	T	E	E	V	L	W	N	V	W	L	E	F	S	I	K	I	K	D	L	P	K	G	A	L	L	N	L	Q	I	Y	C	L	L	Y	Y	V	N	L	L	L	I	D	H	R	F	L	L	R	R	G	E	Y	V	L	H	M	W	Q	I	S	G	F	N	A	D	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S														G	G	G			T	T																		S	B		T	T	S		B										B							G	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	S	A	T	N	P	D	K	E	N	S	M	S	I	S	I	L	L	D	N	H	P	I	A	R	A	E	M	P	N	Q	L	R	K	Q	L	E	A	I	I	A	T	D	P	L	N	P	L	T	A	E	D	K	E	L	L	W	H	F	R	Y	E	S	L	K	H	P	K	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		T	T	T	S																															S		T	T	S													T					T	T		G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	K	L	F	S	S	V	K	W	G	Q	Q	E	I	V	A	K	T	Y	Q	L	L	A	R	R	E	V	W	D	Q	S	A	L	D	V	G	L	T	M	Q	L	L	D	C	N	F	S	D	E	N	V	R	A	I	A	V	Q	K	L	E	S	L	E	D	D	D	V	L	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		T	T													T	T		T					S										T	T	S	T	T															T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	L	Q	L	V	Q	A	V	K	F	E	P	Y	H	D	S	A	L	A	R	F	L	L	K	R	G	L	R	N	K	R	I	G	H	F	L	F	W	F	L	R	S	E	I	A	Q	S	R	H	Y	Q	Q	R	F	A	V	I	L	E	A	Y	L	R	G	C	G	T	A	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G		S	S	S	S																																	T	T	T													T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	D	F	T	Q	Q	V	Q	V	I	E	M	L	Q	K	V	T	L	D	I	K	S	L	S	A	E	K	Y	D	V	S	S	Q	V	I	S	Q	L	K	Q	K	L	E	N	L	Q	N	S	Q	L	P	E	S	F	R	V	P	Y	D	P	G	L	K	A	G	A	L	A	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S			S																				T	T	T	T	S		S					T	T											G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	C	K	V	M	A	S	K	K	K	P	L	W	L	E	F	K	C	A	D	P	T	A	L	S	N	E	T	I	G	I	I	F	K	H	G	D	D	L	R	Q	D	M	L	I	L	Q	I	L	R	I	M	E	S	I	W	E	T	E	S	L	D	L	C	L	L	P	Y	G	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G						S	S	S										S		T	T		S	S											S	S																						T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	S	T	G	D	K	I	G	M	I	E	I	V	K	D	A	T	T	I	A	K	I	Q	Q	S	T	V	G	N	T	G	F	K	D	E	V	L	N	H	W	L	K	E	K	S	P	T	E	E	K	F	Q	A	A	V	E	R	F	V	Y	S	C	A	G	Y	C	V	A	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S								S	S												T		S					S	S											S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	L	G	I	G	D	R	H	N	D	N	I	M	I	T	E	T	G	N	L	F	H	I	D	F	G	H	E	R	V	P	F	V	L	T	P	D	F	L	F	V	M	G	T	S	G	K	K	T	S	P	H	F	Q	K	F	Q	D	I	C	V	K	A	Y	L	A	L	R	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T						G	G	G					T	T	S													S	S										T	T			S	S																						T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.
Sequence	T	N	L	L	I	I	L	F	S	M	M	L	M	T	G	M	P	Q	L	T	S	K	E	D	I	E	Y	I	R	D	A	L	T	V	G	K	N	E	E	D	A	K	K	Y	F	L	D	Q	I	E	V	C	R	D	K	G	W	T	V	Q	F	N	W	F	L	H	L	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	S	S				T	T										T	T	T	T																					T	T						T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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