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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1e6yA_

Fold library idPDB HeaderMoleculeTitle
c1e6yA_PDB header: oxidoreductaseChain: A: PDB Molecule: methyl-coenzyme m reductase i alpha subunit;PDBTitle: methyl-coenzyme m reductase from methanosarcina barkeri


Added to library: Tue Mar 16 14:39:49 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AADIFSKFKKDMEVKFAQEFGSNKQTGGDITDKTAKFLRLGPEQDPRKVEMIKAGKEIAEKRGIAFYNPM
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Known secondary structure (DSSP)
SS

TT






TT
S







GGGSTS



GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence MHSGAPLGQRAITPYTISGTDIVCEPDDLHYVNNAAMQQMWDDIRRTCIVGLDMAHETLEKRLGKEVTPE
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Known secondary structure (DSSP) GSSSS
S
SS



BTTS


GGGGSGGG
TS




 .........150.........160.........170.........180.........190.........200.........210
Sequence TINHYLEVLNHAMPGAAVVQEMMVETHPALVDDCYVKVFTGDDALADEIDKQFLIDINKEFSEEQAAQIK
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Known secondary structure (DSSP) TTT

SS
SS




GGGSTT
S
TTS
GGGB

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASIGKTSWQAIHIPTIVSRTTDGAQTSRWAAMQIGMSFISAYAMCAGEAAVADLSFAAKAALVSMGEMLP
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Known secondary structure (DSSP)
S


S
TTTT

TT




SB

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence ARARGPNEPGGLSFGHLSDIVQTSRVSEDPAKIALEVVGAGCMLYDQIWLGSYMSGGVGFTQYATAAYTD
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Known secondary structure (DSSP)


B
SSSGGGB
S



T




TS
TT

TTTBT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DILDNNTYYDVDYINDKYNGAATVGKDNKVKASLEVVKDIATESTLYGIETYEKFPTALEDHFGGSQRAT
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Known secondary structure (DSSP) TTTSTTSS
SSS





T
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence VLAAAAGVACSLATGNANAGLSGWYLSMYLHKEAWGRLGFFFDLQDQGATNVLSYQGDEGLPDELRGPNY
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Known secondary structure (DSSP) S
T

S



TTT

S

STTT


TTT

TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PNYAMNVGHQGGYAGIAQAAHSGRGDAFTVNPLLKVCFADDLLPFNFAEPRREFGRGAIREFVPAGERSL
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Known secondary structure (DSSP) GGGSS
SSSTTT
S
SS
T

TTSSS
TTSTT



S


GG
 ....
Sequence VIPA
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Known secondary structure (DSSP) GS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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