PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1e42A_

Fold library id	PDB Header	Molecule	Title
c1e42A_	PDB header: endocytosis	Chain: A: PDB Molecule: beta2-adaptin;	PDBTitle: beta2-adaptin appendage domain, from clathrin adaptor ap2

Links to external resources
Added to library: Tue Mar 16 14:21:22 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G G Y V A P K A V W L P A V K A K G L E I S G T F T H R Q G H I Y M E M N F T N K A L Q H M T D F A I Q F N K N S F G V I P S T P L A I H T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T T T T
S S S
B
B T T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P L M P N Q S I D V S L P L N T L G P V M K M E P L N N L Q V A V K N N I D V F Y F S C L I P L N V L F V E D G K M E R Q V F L A T W K D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
S
S
B
S S T T
S S
G G G G B
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P N E N E L Q F Q I K E C H L N A D T V S S K L Q N N N V Y T I A K R N V E G Q D M L Y Q S L K L T N G I W I L A E L R I Q P G N P N Y T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S
T T T
T T B T T S
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence S L K C R A P E V S Q Y I Y Q V Y D S I L K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	G	Y	V	A	P	K	A	V	W	L	P	A	V	K	A	K	G	L	E	I	S	G	T	F	T	H	R	Q	G	H	I	Y	M	E	M	N	F	T	N	K	A	L	Q	H	M	T	D	F	A	I	Q	F	N	K	N	S	F	G	V	I	P	S	T	P	L	A	I	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G	T	T	T											T	T												S	S	S		B										B	T	T					S	S						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	L	M	P	N	Q	S	I	D	V	S	L	P	L	N	T	L	G	P	V	M	K	M	E	P	L	N	N	L	Q	V	A	V	K	N	N	I	D	V	F	Y	F	S	C	L	I	P	L	N	V	L	F	V	E	D	G	K	M	E	R	Q	V	F	L	A	T	W	K	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		T	T											S		S		B				S	S	T	T									S	S											G	G	G	G	B		S	S															S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	N	E	N	E	L	Q	F	Q	I	K	E	C	H	L	N	A	D	T	V	S	S	K	L	Q	N	N	N	V	Y	T	I	A	K	R	N	V	E	G	Q	D	M	L	Y	Q	S	L	K	L	T	N	G	I	W	I	L	A	E	L	R	I	Q	P	G	N	P	N	Y	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G								S														T	T	T										T	T										B	T	T	S											T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	S	L	K	C	R	A	P	E	V	S	Q	Y	I	Y	Q	V	Y	D	S	I	L	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	G	G	G													T