Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1e3pA_

Fold library idPDB HeaderMoleculeTitle
c1e3pA_PDB header: polyribonucleotide transferaseChain: A: PDB Molecule: guanosine pentaphosphate synthetase;PDBTitle: tungstate derivative of streptomyces antibioticus pnpase/2 gpsi enzyme


Added to library: Fri Jan 11 00:34:28 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NETHYAEAVIDNGAFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKNPKDQLDFFPLTVDVEE
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)



GGG
SSS
TTSSTTT
TT
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence RMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQVVATIMALNPDHLYDVVAINAAS
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
GGGGT



STTSS

S

GGGB
TTB


TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence ASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDAVFDMVVAGRVLEDGDVAIMMVEAEATEKTIQL
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TTSSB



TTS

TT
TTS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VKDGAEAPTEEVVAAGLDAAKPFIKVLCKAQADLAAKAAKPTGEFPVFLDYQDDVLEALSAAVRPELSAA
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TT












B

S

 .........290.........300.........310.........320.........330.........340.........350
Sequence LTIAGKQDREAELDRVKALAAEKLLPEFEGREKEISAAYRALTKSLVRERVIAEKKRIDGRGVTDIRTLA
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) TT

STTSTTTT
S
T
B
TTS
BTT



 .........360.........370.........380.........390.........400.........410.........420
Sequence AEVEAIPRVHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSPKR
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

SSSSSTTGGGS

SSSS

S

GGGGT




SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence REIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVPLKAPVAGIAMGL
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) GGG


TTTS

SS
T


SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence ISQEINGETHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLDGIPASVLAAALKQARDARLHIL
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) SSS
S


S
SSS
SS


 .........570.........580.........590.........600.........610.........620.........630
Sequence DVMMEAIDTPDEMSPNAPRIITVNQIQEDTGAEIYIGAADGPAAEAGSVVKTTFGAFVSLLDGLLHLGVG
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
SS




TTS
B




TT




S




BSS


B


S










SS
 .........640.....
Sequence QKVQVEIAEIDSRGK
Predicted secondary structure





SS confidence














Known secondary structure (DSSP)
B








SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D