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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1dxlC_

Fold library idPDB HeaderMoleculeTitle
c1dxlC_PDB header: oxidoreductaseChain: C: PDB Molecule: dihydrolipoamide dehydrogenase;PDBTitle: dihydrolipoamide dehydrogenase of glycine decarboxylase2 from pisum sativum


Added to library: Tue Mar 16 12:27:04 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANH
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Known secondary structure (DSSP)

B
S

ST


SSSSS
ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHI
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Known secondary structure (DSSP)


S




T
S
SSSS
BTTTB


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV
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Known secondary structure (DSSP)





SSS


TTS
T
SS

SSS
ST

SSSSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSG
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Known secondary structure (DSSP) SSS
TTS

TT





B
SSSS
B

B

SSSS

B



S





TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPG
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Known secondary structure (DSSP)


TTT




TTS




TTSB
SSTT
STTSSS


TS




TTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence VVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAG
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Known secondary structure (DSSP)
SSS

TT

GGG
T



TTT
BTT
 .........430.........440.........450.........460.......
Sequence ELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHI
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Known secondary structure (DSSP) TT
BS


SS
TTS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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