Fold library entry viewer: c1djyB_

Added to library: Tue Mar 16 12:16:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	K	M	N	F	K	E	L	K	D	F	L	K	E	L	N	I	Q	V	D	D	G	Y	A	R	K	I	F	R	E	C	D	H	S	Q	T	D	S	L	E	D	E	E	I	E	T	F	Y	K	M	L	T	Q	R	A	E	I	D	R	A	F	E	E	A	A	G	S	A	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T															T		S	S		S	S															T														T	T	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	V	E	R	L	V	T	F	L	Q	H	Q	Q	R	E	E	E	A	G	P	A	L	A	L	S	L	I	E	R	Y	E	P	S	E	T	A	K	A	Q	R	Q	M	T	K	D	G	F	L	M	Y	L	L	S	A	D	G	N	A	F	S	L	A	H	R	R	V	Y	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S			S	S		S																				T	T													S	T	T	T	B	S	B		G	G	G	G	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	D	Q	P	L	S	H	Y	L	V	S	S	S	H	N	T	Y	L	L	E	D	Q	L	T	G	P	S	S	T	E	A	Y	I	R	A	L	C	K	G	C	R	C	L	E	L	D	C	W	D	G	P	N	Q	E	P	I	I	Y	H	G	Y	T	F	T	S	K	I	L	F	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		G	G	G							S	S	T	T	B	S	S		S	S	S			B											T	T												G	G	G							T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	V	L	R	A	I	R	D	Y	A	F	K	A	S	P	Y	P	V	I	L	S	L	E	N	H	C	S	L	E	Q	Q	R	V	M	A	R	H	L	R	A	I	L	G	P	I	L	L	D	Q	P	L	D	G	V	T	T	S	L	P	S	P	E	Q	L	K	G	K	I	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T	S		S	S																											T	T	S	B			S			S	S			S	S				T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	G	K	K	L	G	G	L	D	K	L	K	L	V	P	E	L	S	D	M	I	I	Y	C	K	S	V	H	F	G	G	F	S	S	P	G	T	S	G	Q	A	F	Y	E	M	A	S	F	S	E	S	R	A	L	R	L	L	Q	E	S	G	N	G	F	V	R	H	N	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T							T	T			S												S	S	S		S			T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	C	L	S	R	I	Y	P	A	G	W	R	T	D	S	S	N	Y	S	P	V	E	M	W	N	G	G	C	Q	I	V	A	L	N	F	Q	T	P	G	P	E	M	D	V	Y	L	G	C	F	Q	D	N	G	G	C	G	Y	V	L	K	P	A	F	L	R	D	P	N	T	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								T	T		T	T											T	T	T								T	T	S		S										T	T	S	G	G	G		S						G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	S	R	A	L	T	Q	G	P	W	W	R	P	E	R	L	R	V	R	I	I	S	G	Q	Q	L	P	K	V	N	K	N	K	N	S	I	V	D	P	K	V	I	V	E	I	H	G	V	G	R	D	T	G	S	R	Q	T	A	V	I	T	N	N	G	F	N	P	R	W	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			S	S	T	T																				S			S	S													S	S	G	G	G										T	T		S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	M	E	F	E	F	E	V	T	V	P	D	L	A	L	V	R	F	M	V	E	D	Y	D	S	S	S	K	N	D	F	I	G	Q	S	T	I	P	W	N	S	L	K	Q	G	Y	R	H	V	H	L	L	S	K	N	G	D	Q	H	P	S	A	T	L	F	V	K	I	S	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		G	G	G												T	T	S												G	G	G	B												T	T	S
	.
Sequence	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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