Fold library entry viewer: c1d5aA_

Added to library: Tue Mar 16 13:16:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	L	D	A	D	Y	I	T	E	D	G	K	P	V	I	R	V	F	K	K	E	K	G	E	F	K	I	D	Y	D	R	D	F	E	P	Y	I	Y	A	L	L	K	D	D	S	A	I	E	D	I	K	K	I	T	A	E	R	H	G	T	T	V	R	V	T	R	A	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T											T	T																			S	S	T	T		S	T	T	T	T	T						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	K	K	K	F	L	G	R	P	V	E	V	W	K	L	Y	F	T	H	P	Q	D	V	P	A	I	R	D	K	I	R	E	H	P	A	V	V	D	I	Y	E	Y	D	I	P	F	A	K	R	Y	L	I	D	R	G	L	I	P	M	E	G	D	E	E	L	R	M	L	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S										S	S	T	T										T	T	S	T	T						S			S										T	T			T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	I	E	T	L	A	H	A	G	A	A	A	G	A	G	P	I	L	M	I	S	Y	A	D	E	E	G	A	R	V	I	T	W	K	N	I	D	L	P	Y	V	E	S	V	S	T	E	K	E	M	I	K	R	F	L	K	V	I	Q	E	K	D	P	D	V	L	I	T	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S			S	S		S	S		S										T	T							S	S					T	T					S	S																		S					S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	D	N	F	D	F	A	Y	L	K	K	R	S	E	M	L	G	V	K	F	I	L	G	R	D	G	S	E	P	K	I	Q	R	M	G	D	R	F	A	V	E	V	K	G	R	I	H	F	D	L	Y	P	V	I	R	R	T	I	N	L	P	T	Y	T	L	E	T	V	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T											T	T	T						S	T	T	S								S	S	S	S						T	T	S																S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	V	F	G	Q	P	A	E	K	V	Y	A	E	E	I	A	E	A	W	A	S	G	E	G	L	E	R	V	A	R	Y	S	M	E	D	A	K	A	T	Y	E	L	G	K	E	F	F	P	M	E	A	Q	L	S	R	L	V	G	Q	S	L	W	D	V	S	R	S	S	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S								S	S								S	G	G	G	G	T	T																															T	S						T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	L	V	E	W	F	L	L	R	K	A	Y	E	R	N	D	V	A	P	N	K	P	D	E	R	E	L	A	R	R	T	E	S	Y	A	G	G	Y	V	K	E	P	E	K	G	L	W	E	N	I	V	Y	L	D	Y	K	S	L	Y	P	S	I	I	I	T	H	N	V	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	B															T	T													S												S									T	T			G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	T	L	N	R	E	G	C	R	E	Y	D	V	A	P	Q	V	G	H	R	F	C	K	D	F	P	G	F	I	P	S	L	L	G	D	L	L	E	E	R	Q	K	V	K	K	K	M	K	A	T	V	D	P	I	E	R	K	L	L	D	Y	R	Q	R	A	I	K	I	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T		T	T		S	S					T	T	T							S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	S	Y	Y	G	Y	Y	A	Y	A	N	A	R	W	Y	C	R	E	C	A	E	S	V	T	A	W	G	R	Q	Y	I	E	T	T	M	R	E	I	E	E	K	F	G	F	K	V	L	Y	A	D	T	D	G	F	F	A	T	I	P	G	A	D	A	E	T	V	K	N	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T		T	T		T	T																																					S	S							S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	E	F	L	N	Y	I	N	P	R	L	P	G	L	L	E	L	E	Y	E	G	F	Y	R	R	G	F	F	V	T	K	K	K	Y	A	V	I	D	E	E	D	K	I	T	T	R	G	L	E	I	V	R	R	D	W	S	E	I	A	K	E	T	Q	A	R	V	L	E	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	S	S	T	T																	T	T							T	T							S		S				S			B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	K	H	G	D	V	E	E	A	V	R	I	V	K	E	V	T	E	K	L	S	R	H	E	V	P	P	E	K	L	V	I	Y	E	A	G	P	H	V	A	A	A	A	T	V	I	S	Y	I	V	L	K	G	P	G	R	V	G	D	R	A	I	P	F	D	E	F	D	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																		T	T	T		S		G	G	G	S													S						B		B	S		S		S	S	S				B		S	S	S			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Sequence	K	H	R	Y	D	A	E	Y	Y	I	E	N	Q	V	L	P	A	V	E	R	I	L	R	A	F	G	Y	R	K	E	D	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			B		T	T	T	T															T	T	T			G	G	G	T

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PDB structure

FASTA sequence

Hidden Markov model

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